DRSC/TRiP Functional Genomics Resources

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Protein Alignment sca and angptl2a

DIOPT Version :9

Sequence 1:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_001025401.1 Gene:angptl2a / 569092 ZFINID:ZDB-GENE-080721-15 Length:525 Species:Danio rerio


Alignment Length:567 Identity:132/567 - (23%)
Similarity:211/567 - (37%) Gaps:168/567 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 VQQRSSTFEDLATIRSDYQQLKLDLAAQRERQQQTEVYVQELREEMLQQEQDFQHALVKLQQRTR 288
            |.||.||  ....:.|...:..|:   .|..:|:.|:...||.::..|.|        .|||...
Zfish    70 VPQRKST--GAICVNSKEPEALLE---NRVNKQELELLNGELHKQRRQIE--------TLQQLVE 121

  Fly   289 KDGSSASVEEESGSQEANQEQTGLETTADHKRRHCRFQSEQIHQL--QLAQRNLRRQVNGLRFHH 351
            .||                   |:.......|:..|..:.::.||  ||....:|::.|.|....
Zfish   122 VDG-------------------GVVNEVKLLRKESRNMNARVTQLYMQLLHEIIRKRDNALEVSQ 167

  Fly   352 IDERVRSIEVEQHRIANANFNLSSQIASLDKLHTSMLELLEDVEGLQTKMDKSIPELRHEISKLE 416
            ::.||.:                         |||.::          ::.....:|.|:...| 
Zfish   168 LENRVLN-------------------------HTSEMQ----------QLTSRYRDLEHKYQHL- 196

  Fly   417 FANAQITSEQSLIREEGTNAARSLQAMAVSVSVLQEEREGMRKLSANVDQLRTNVDRLQSLVNDE 481
               |.:.|.||                ||.|.:.::.|.|                   ..|...
Zfish   197 ---ASLASNQS----------------AVIVQLEEQCRRG-------------------GFVGGR 223

  Fly   482 MKNKLTHLNKPHKRPHHQNVQAQMPQDDSPIDSVLAET----------------LVSELENVETQ 530
            .       .:|::.|......||.||...|....:..:                :.:|::: :..
Zfish   224 Q-------TRPYQPPVVPPQPAQTPQHRQPPPPPVHHSPARPFHPPTYPRQNNQMTNEIQS-DQN 280

  Fly   531 YEAIINKLPHDCSEVHT-QTD--------------------GLHLIAPAGQRHPLMTHC----TA 570
            .:|:.:.||.:.||.|: .||                    |:.|:.|......:...|    ..
Zfish   281 SKAMPSALPTEQSETHSFSTDKLSGPFKDCLQALEEGHSNSGMFLLKPENTNKLMQVWCDQRHDP 345

  Fly   571 DGWTTVQRRFDGSADFNRSWADYAQGFGAPGGEFWIGNEQLHHLTLDNCSRLQVQMQDIYDNVWV 635
            .|||.:|||.|||.:|.|:|..|.||||...||:|:|.|.::.||.....:|.|.::|.......
Zfish   346 GGWTVIQRRMDGSVNFFRNWETYKQGFGNIDGEYWLGLENIYWLTNQGNYKLLVTLEDWSGRKTF 410

  Fly   636 AEYKRFYISSRADGYRLHIAEYSGNASDALNYQQGMQFSAIDDDRDISQTHCAANYEGGWWFSHC 700
            |||..|.:...||.|::.:..|.|||.|::.:..|.||:.:|.|.|....:||...:||||::.|
Zfish   411 AEYASFRLEPEADFYKMRVGRYHGNAGDSMTWHNGKQFTTLDRDHDAYTGNCAHYQKGGWWYNAC 475

  Fly   701 QHANLNG----------RYNLGLTWFDAARNEWIAVKSSRMLVKRLP 737
            .|:||||          ||..|:.|.: .|....::|...|:::..|
Zfish   476 AHSNLNGVWYRGGHYRSRYQDGVYWAE-FRGGSYSLKKVTMMIRPNP 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaNP_476710.2 PRK13923 <200..300 CDD:276343 19/75 (25%)
FBG 538..736 CDD:214548 75/232 (32%)
angptl2aNP_001025401.1 DUF1875 <50..>147 CDD:286100 22/108 (20%)
Fib_alpha 119..215 CDD:285864 27/169 (16%)
FReD 305..519 CDD:238040 68/214 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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