DRSC/TRiP Functional Genomics Resources

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Protein Alignment sca and angptl6

DIOPT Version :10

Sequence 1:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_001014821.1 Gene:angptl6 / 561927 ZFINID:ZDB-GENE-030131-9735 Length:489 Species:Danio rerio


Alignment Length:533 Identity:141/533 - (26%)
Similarity:213/533 - (39%) Gaps:149/533 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 DGSSASVEEESGS---QEANQEQTGLETTADHKRRHCRFQSEQIHQLQLAQRNLRRQVNGLRFHH 351
            ||...||  .|||   .:|||::.  ...::.|:..|.:                          
Zfish    22 DGRKESV--GSGSSKGDDANQKRP--SRASETKQSRCSY-------------------------- 56

  Fly   352 IDERVRSIEVEQHRIANANFNLSSQIASLDKLHTSMLELLEDVEGLQTKMDKSIPELRHEISKLE 416
                  :..|.|.::..| ..|.::.|.:::...:.|..|  :|..|.::|:....|..|     
Zfish    57 ------TFIVPQQKLTGA-LCLITESARVNRSEVASLRAL--LERQQDQLDQMRGRLEEE----- 107

  Fly   417 FANAQITSEQSLIREEGTNA-ARSLQAMAVSVSVL-------QEER--EG--------MRKLSAN 463
               ..:.||..::|.|..|. ||..|..|..:|.:       :|:|  ||        :.::|:|
Zfish   108 ---GTLASEMRILRRESVNMNARIAQLYAQLLSEIIQKKEQVEEQRRLEGLLLNATSQLHQVSSN 169

  Fly   464 VDQLRTNVDRLQSLVNDEMK-----------------------------NKLTHLN-------KP 492
            ...|....|.|.||||::.|                             :.|.::|       :.
Zfish   170 YRDLEKKYDTLASLVNNQSKIITLLEKQCQLKTSTKELQEATSLPAQQSSVLVNINTEPKDVQRD 234

  Fly   493 HKRPHHQNVQAQMPQ------DDSPIDSVLAETLVSELENVETQYEAI-INKLP---HDCSEV-- 545
            ...|.|   |||..|      ||||...            .||.:.:. ..|.|   |||..|  
Zfish   235 QSAPFH---QAQARQELLETFDDSPGPP------------TETPFISFPSTKSPGPWHDCHNVLE 284

  Fly   546 -HTQTDGLHLIAPAGQRHPLMTHC----TADGWTTVQRRFDGSADFNRSWADYAQGFGAPGGEFW 605
             ..:|.|::|:.|......|...|    ...|||.:|||.|||.:|.|:|..|.||||...||:|
Zfish   285 SGEKTSGIYLLRPRNTNRLLQAWCDQSRAQGGWTVIQRRQDGSVNFFRTWDQYKQGFGNLDGEYW 349

  Fly   606 IGNEQLHHLTLDNCSRLQVQMQDIYDNVWVAEYKRFYISSRADGYRLHIAEYSGNASDALNYQQG 670
            :|.|.|:.||.....:|:|.|:|.......|||..|.:...:|.|||.:..|.|.|.|:|::...
Zfish   350 LGLEHLYWLTSQATYKLRVAMEDWQGRQVYAEYDSFRVEPESDWYRLRLGSYQGTAGDSLSWHNN 414

  Fly   671 MQFSAIDDDRDISQTHCAANYEGGWWFSHCQHANLNG----------RYNLGLTWFDAARNEWIA 725
            ..|:.:|.|:|....:||...:||||:..|.|:||||          ||..|:.|.:.....: :
Zfish   415 KAFTTLDRDKDAYTGNCAHYQKGGWWYHMCAHSNLNGVWYRGGHYRSRYQDGVYWAEFHGGSY-S 478

  Fly   726 VKSSRMLVKRLPA 738
            :|...|::|  ||
Zfish   479 LKKVAMMIK--PA 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaNP_476710.2 PRK03918 134..>485 CDD:235175 48/244 (20%)
FBG 538..736 CDD:214548 76/217 (35%)
angptl6NP_001014821.1 EnvC 63..>245 CDD:443969 41/195 (21%)
FReD 274..488 CDD:238040 75/216 (35%)

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