DRSC/TRiP Functional Genomics Resources

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Protein Alignment sca and MGC107908

DIOPT Version :10

Sequence 1:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_001015738.1 Gene:MGC107908 / 548455 XenbaseID:XB-GENE-29099135 Length:319 Species:Xenopus tropicalis


Alignment Length:189 Identity:68/189 - (35%)
Similarity:93/189 - (49%) Gaps:15/189 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   563 PLMTHCTAD----GWTTVQRRFDGSADFNRSWADYAQGFGAPGGEFWIGNEQLHHLTLDNCSRLQ 623
            ||...|..:    ||...|||.|||.||.|.|..|.:|||....|||:||:.||.||.....:|:
 Frog   132 PLSVLCDMETDGGGWIVFQRRADGSVDFYRDWNSYKRGFGRKESEFWLGNDNLHLLTATGNFQLR 196

  Fly   624 VQMQDIYDNVWVAEYKRFYISSRADGYRLHIAEYS-GNASDALNYQQGMQFSAIDDDRDISQT-H 686
            |.:.|..:....|.|..|.|:..|..|.|.:..:: |:|.|:|:..:...||..|.|.||..| .
 Frog   197 VDLTDFSEQRTYAAYSNFRIAGEAQNYTLSLGGFTGGDAGDSLSGHKNYPFSTKDRDNDIHLTAS 261

  Fly   687 CAANYEGGWWFSHCQHANLNG--------RYNLGLTWFDAARNEWIAVKSSRMLVKRLP 737
            ||..|:|.||::.|..:||||        .|..|:.| .|::....:.|.|.|..:..|
 Frog   262 CAQTYKGAWWYTKCHSSNLNGLYLRGNHTSYANGVNW-GASKGIHYSYKVSEMKFRPQP 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaNP_476710.2 PRK03918 134..>485 CDD:235175
FBG 538..736 CDD:214548 67/186 (36%)
MGC107908NP_001015738.1 gly_rich_SclB <41..>103 CDD:468478
FReD 107..317 CDD:238040 67/185 (36%)
Blue background indicates that the domain is not in the aligned region.

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