DRSC/TRiP Functional Genomics Resources

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Protein Alignment sca and angptl2b

DIOPT Version :10

Sequence 1:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_001119950.1 Gene:angptl2b / 503514 ZFINID:ZDB-GENE-050624-1 Length:519 Species:Danio rerio


Alignment Length:460 Identity:112/460 - (24%)
Similarity:185/460 - (40%) Gaps:111/460 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 DKLHTSMLELLEDVEG---LQTKMDKSIPELRHEISKLEFANAQ--------------------I 422
            ||...:.:...:.|.|   :.:|..:::.|.|....:||..|::                    |
Zfish    64 DKCSYTFIVPQQKVTGAICVNSKEPEAVLENRVNKQELELLNSELHKQKRQIETLQQLVEVDGGI 128

  Fly   423 TSEQSLIREEGTNA-ARSLQAMAVSVSVLQEEREGMRKLSANVDQLRTNVDRLQSLVN--DEMKN 484
            .:|..|:|:|..|. :|..|.....:..:..:|:...:||...:::......:..|.|  .::::
Zfish   129 VNEVKLLRKESRNMNSRVTQLYMQLLHEIIRKRDNALELSQLENKILNQTSEMLQLTNRYKDLEH 193

  Fly   485 KLTHL----------------------------------NKPHKRPHHQNVQAQMPQDDSPIDSV 515
            |..||                                  .:|..:||.|      |:...|::..
Zfish   194 KYQHLASLANNQSALIALLEAQCQRGPPVPRVPVQPQPQPQPQPQPHPQ------PRPSPPLNKP 252

  Fly   516 LAETLVSELENVETQYEAIIN-KLP------------------------HDCSEV----HTQTDG 551
            ......:....:..:.::..| |:|                        .||.|.    ||.: |
Zfish   253 YQPPTFNRNNQITNEIQSDQNLKVPPAPPPTMPGGTHSPSTTNKPSGPWKDCLEALEDGHTNS-G 316

  Fly   552 LHLIAPAGQRHPLMTHC----TADGWTTVQRRFDGSADFNRSWADYAQGFGAPGGEFWIGNEQLH 612
            :||:.|......:...|    ...|||.:|||.|||.:|.|:|..|.||||...||:|:|.|.::
Zfish   317 MHLVKPDNTNKLMQVWCDQRQDPGGWTVIQRRMDGSVNFFRNWETYKQGFGNIDGEYWLGLENIY 381

  Fly   613 HLTLDNCSRLQVQMQDIYDNVWVAEYKRFYISSRADGYRLHIAEYSGNASDALNYQQGMQFSAID 677
            .:|.....:|.|.::|.......|||..|.:...||.|||.:..|.|||.|:|.:..|.||:.:|
Zfish   382 WITNQGNYKLLVTLEDWSGRKTFAEYASFRLEPEADFYRLRVGRYHGNAGDSLTWHNGKQFTTLD 446

  Fly   678 DDRDISQTHCAANYEGGWWFSHCQHANLNG----------RYNLGLTWFDAARNEWIAVKSSRML 732
            .|.|:...:||...:||||::.|.|:||||          ||..|:.|.: .|....::|...|:
Zfish   447 RDHDVYTGNCAHYQKGGWWYNACAHSNLNGVWYRGGHYRSRYQDGVYWAE-FRGGAYSLKKVVMM 510

  Fly   733 VKRLP 737
            ::..|
Zfish   511 IRPNP 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaNP_476710.2 PRK03918 134..>485 CDD:235175 23/129 (18%)
FBG 538..736 CDD:214548 77/239 (32%)
angptl2bNP_001119950.1 YhaN 95..>218 CDD:443752 20/122 (16%)
FReD 299..513 CDD:238040 76/215 (35%)

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