DRSC/TRiP Functional Genomics Resources

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Protein Alignment sca and angptl2b

DIOPT Version :9

Sequence 1:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_001119950.1 Gene:angptl2b / 503514 ZFINID:ZDB-GENE-050624-1 Length:519 Species:Danio rerio


Alignment Length:460 Identity:112/460 - (24%)
Similarity:185/460 - (40%) Gaps:111/460 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 DKLHTSMLELLEDVEG---LQTKMDKSIPELRHEISKLEFANAQ--------------------I 422
            ||...:.:...:.|.|   :.:|..:::.|.|....:||..|::                    |
Zfish    64 DKCSYTFIVPQQKVTGAICVNSKEPEAVLENRVNKQELELLNSELHKQKRQIETLQQLVEVDGGI 128

  Fly   423 TSEQSLIREEGTNA-ARSLQAMAVSVSVLQEEREGMRKLSANVDQLRTNVDRLQSLVN--DEMKN 484
            .:|..|:|:|..|. :|..|.....:..:..:|:...:||...:::......:..|.|  .::::
Zfish   129 VNEVKLLRKESRNMNSRVTQLYMQLLHEIIRKRDNALELSQLENKILNQTSEMLQLTNRYKDLEH 193

  Fly   485 KLTHL----------------------------------NKPHKRPHHQNVQAQMPQDDSPIDSV 515
            |..||                                  .:|..:||.|      |:...|::..
Zfish   194 KYQHLASLANNQSALIALLEAQCQRGPPVPRVPVQPQPQPQPQPQPHPQ------PRPSPPLNKP 252

  Fly   516 LAETLVSELENVETQYEAIIN-KLP------------------------HDCSEV----HTQTDG 551
            ......:....:..:.::..| |:|                        .||.|.    ||.: |
Zfish   253 YQPPTFNRNNQITNEIQSDQNLKVPPAPPPTMPGGTHSPSTTNKPSGPWKDCLEALEDGHTNS-G 316

  Fly   552 LHLIAPAGQRHPLMTHC----TADGWTTVQRRFDGSADFNRSWADYAQGFGAPGGEFWIGNEQLH 612
            :||:.|......:...|    ...|||.:|||.|||.:|.|:|..|.||||...||:|:|.|.::
Zfish   317 MHLVKPDNTNKLMQVWCDQRQDPGGWTVIQRRMDGSVNFFRNWETYKQGFGNIDGEYWLGLENIY 381

  Fly   613 HLTLDNCSRLQVQMQDIYDNVWVAEYKRFYISSRADGYRLHIAEYSGNASDALNYQQGMQFSAID 677
            .:|.....:|.|.::|.......|||..|.:...||.|||.:..|.|||.|:|.:..|.||:.:|
Zfish   382 WITNQGNYKLLVTLEDWSGRKTFAEYASFRLEPEADFYRLRVGRYHGNAGDSLTWHNGKQFTTLD 446

  Fly   678 DDRDISQTHCAANYEGGWWFSHCQHANLNG----------RYNLGLTWFDAARNEWIAVKSSRML 732
            .|.|:...:||...:||||::.|.|:||||          ||..|:.|.: .|....::|...|:
Zfish   447 RDHDVYTGNCAHYQKGGWWYNACAHSNLNGVWYRGGHYRSRYQDGVYWAE-FRGGAYSLKKVVMM 510

  Fly   733 VKRLP 737
            ::..|
Zfish   511 IRPNP 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaNP_476710.2 PRK13923 <200..300 CDD:276343
FBG 538..736 CDD:214548 77/239 (32%)
angptl2bNP_001119950.1 RILP-like 98..216 CDD:304877 19/117 (16%)
FReD 299..513 CDD:238040 76/215 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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