DRSC/TRiP Functional Genomics Resources

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Protein Alignment sca and CG7668

DIOPT Version :9

Sequence 1:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_649170.1 Gene:CG7668 / 40190 FlyBaseID:FBgn0036929 Length:422 Species:Drosophila melanogaster


Alignment Length:510 Identity:119/510 - (23%)
Similarity:191/510 - (37%) Gaps:155/510 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 QRTRKDGSSASVEEESGSQEANQEQTGLETTA----DHKRRHCRFQSEQIHQLQLAQRNLR-RQV 344
            |.:|....| |.|..|.|.::..|..|  |:|    .||::..|..||...:|..|:.||: :|.
  Fly    11 QNSRSSPDS-STENNSSSSDSEMEFVG--TSARGMLKHKKKDERKISELTRKLAEAEINLKAQQE 72

  Fly   345 NGLRFHHI----DERVRSIEVEQHRIANANFNLSSQI--ASLDKLHTSMLELLEDVE-------- 395
            .|....:.    |:.::::::        :.:|.:|.  .::.||.|.:::|..|::        
  Fly    73 KGSILENCIKDKDDFIKTLQL--------SIDLVTQTKEMTIQKLQTQIMDLQSDLDLSRITIKK 129

  Fly   396 -------GLQTKMDKSIPELRHEISKLEFANAQITSEQSLIREEGTNAARSLQAMAVSVSVLQEE 453
                   ....|:.|...||..|..|....|.||...:.::..:....||               
  Fly   130 NDGGNCAPAHDKVVKERKELNMENGKFREGNDQIVEIEKILNSKEAEIAR--------------- 179

  Fly   454 REGMRKLSANVDQLRTNVDRLQSLV--NDEMKNKLTHL-------NKPHKRPHHQNVQAQMPQDD 509
                  |...:|:.:..:.:|:..|  .||...|:|.:       ||.|              |:
  Fly   180 ------LEFKIDESKLKIVQLEGAVKAKDEKIVKMTEILSEYNVNNKDH--------------DE 224

  Fly   510 ------SPIDSVLAETLVSELENVETQYEAIINKLPHDCSEVHTQTDGLHLIAPAGQRHPLMTHC 568
                  |.:.|:...|| .:.|...:.:|.|                      |:..|       
  Fly   225 FVLLGSSKLPSIKLVTL-PDFEPFASVFEDI----------------------PSAGR------- 259

  Fly   569 TADGWTTVQRRFDGSADFNRSWADYAQGFGAPGGEFWIGNEQLHHLTLDNCSRLQVQMQDIYDNV 633
               ||..:|||.|||.| |.:.::...|.|..|||||:|.::||.:|......|.:|:.| :||.
  Fly   260 ---GWMIIQRRIDGSFD-NATESNIITGCGDLGGEFWLGLQKLHKMTTHRRMELYIQLVD-FDNA 319

  Fly   634 WV-AEYKRFYISSRADGYR-LHIAEYSGNASDALNYQ-----QGMQFSAIDDDRDISQTHCAANY 691
            .. |.|..|.|......|: |.:.||||||.||....     .|..| |::..:           
  Fly   320 SAYARYDNFVIGDEKQKYKLLSLGEYSGNAGDAFRSHINHIIVGNPF-AMESSK----------- 372

  Fly   692 EGGWWFSHCQHANLNGRYNLGLTWFDAARNEW---------IAVKSSRMLVKRLP 737
               ||.:  .:.||||:|.......|.....|         ..:||.:||::.:|
  Fly   373 ---WWGT--MNCNLNGKYRNSKVELDTTDGIWWGNWNVGNRYPLKSCKMLIRPMP 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaNP_476710.2 PRK13923 <200..300 CDD:276343 5/14 (36%)
FBG 538..736 CDD:214548 58/213 (27%)
CG7668NP_649170.1 DUF16 146..>212 CDD:279814 17/86 (20%)
FReD 245..421 CDD:294064 61/226 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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