DRSC/TRiP Functional Genomics Resources

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Protein Alignment sca and ANGPTL3

DIOPT Version :9

Sequence 1:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_055310.1 Gene:ANGPTL3 / 27329 HGNCID:491 Length:460 Species:Homo sapiens


Alignment Length:450 Identity:113/450 - (25%)
Similarity:199/450 - (44%) Gaps:84/450 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   356 VRSIEVEQHRIANANF-NLS----SQIASLDKLHTSMLELLEDVEGLQTKMDKSIPELRHEISKL 415
            |.|..::|.   |::| :||    |:.|.||.:......||:...||:..:.|:..::.....||
Human    14 VISSRIDQD---NSSFDSLSPEPKSRFAMLDDVKILANGLLQLGHGLKDFVHKTKGQINDIFQKL 75

  Fly   416 EFANA---QITSEQSLIREEGTNAARSLQAMAVSVSVLQEEREGMR-KLSANVDQLRTNVDRLQS 476
            ...:.   .::.:.|.|:||    .:.|:.....:.|..||.:.|. :|::.::.|......||.
Human    76 NIFDQSFYDLSLQTSEIKEE----EKELRRTTYKLQVKNEEVKNMSLELNSKLESLLEEKILLQQ 136

  Fly   477 LVNDEMKNKLTHL--NKPHKRPHHQNV---QAQMPQDDSPIDSVL--AETLVSELENVETQYEAI 534
            .|. .::.:||:|  |:| :.|.|..|   :..:.:.|:.|..:|  .|....:|....:|.:.|
Human   137 KVK-YLEEQLTNLIQNQP-ETPEHPEVTSLKTFVEKQDNSIKDLLQTVEDQYKQLNQQHSQIKEI 199

  Fly   535 INKL---------------------------------------PHDCSEVHTQ---TDGLHLIAP 557
            .|:|                                       |.:|:.::.:   |.|::.|.|
Human   200 ENQLRRTSIQEPTEISLSSKPRAPRTTPFLQLNEIRNVKHDGIPAECTTIYNRGEHTSGMYAIRP 264

  Fly   558 AGQR--HPLMTHCTADGWTTVQRRFDGSADFNRSWADYAQGFGAPGGEFWIGNEQLHHLTLDNCS 620
            :..:  |......:...||.:|.|.|||.:||.:|.:|..|||...||||:|.|:::.:...:..
Human   265 SNSQVFHVYCDVISGSPWTLIQHRIDGSQNFNETWENYKYGFGRLDGEFWLGLEKIYSIVKQSNY 329

  Fly   621 RLQVQMQDIYDNVWVAEYKRFYISSRADGYRLHIAEYSGNASDALNYQQGMQFSAIDDDRDISQT 685
            .|:::::|..||....||. ||:.:....|.||:...:||..:|:...:.:.||.. |.:.....
Human   330 VLRIELEDWKDNKHYIEYS-FYLGNHETNYTLHLVAITGNVPNAIPENKDLVFSTW-DHKAKGHF 392

  Fly   686 HCAANYEGGWWF-SHCQHANLNGRYN-----------LGLTWFDAARNEWIAVKSSRMLV 733
            :|...|.||||: ..|...||||:||           .||:| .:......::||::||:
Human   393 NCPEGYSGGWWWHDECGENNLNGKYNKPRAKSKPERRRGLSW-KSQNGRLYSIKSTKMLI 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaNP_476710.2 PRK13923 <200..300 CDD:276343
FBG 538..736 CDD:214548 65/251 (26%)
ANGPTL3NP_055310.1 SMC_N <84..>215 CDD:330553 31/136 (23%)
FReD 243..453 CDD:238040 64/211 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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