DRSC/TRiP Functional Genomics Resources

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Protein Alignment sca and Angptl2

DIOPT Version :9

Sequence 1:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_036053.2 Gene:Angptl2 / 26360 MGIID:1347002 Length:493 Species:Mus musculus


Alignment Length:441 Identity:120/441 - (27%)
Similarity:191/441 - (43%) Gaps:75/441 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 VEQHRIANA---NFNLSSQIASLDKLHTSMLELLEDVEGLQTKMDKSIPELRHEISKLEFANAQI 422
            |.|.|:..|   | :...::...:::|...||||.: |.|:.|  :.|..|:    :|...:..|
Mouse    60 VPQQRVTGAICVN-SKEPEVHLENRVHKQELELLNN-ELLKQK--RQIETLQ----QLVEVDGGI 116

  Fly   423 TSEQSLIREEGTNA-ARSLQAMAVSVSVLQEEREGMRKLSANVDQ-LRTNVDRLQ--SLVNDEMK 483
            .||..|:|:|..|. :|..|.....:..:..:|:...:||...:: |....|.||  |...| ::
Mouse   117 VSEVKLLRKESRNMNSRVTQLYMQLLHEIIRKRDNALELSQLENRILNQTADMLQLASKYKD-LE 180

  Fly   484 NKLTHLNK-PHKR--------PHHQNVQAQMPQDDSP-------IDSVLAETLVSELENVETQYE 532
            :|..||.. .|.:        .|.|.|.|..|....|       ........:::::...|.|.:
Mouse   181 HKFQHLAMLAHNQSEVIAQLEEHCQRVPAARPMPQPPPAAPPRVYQPPTYNRIINQISTNEIQSD 245

  Fly   533 AIINKLP-----------------------HDCSEV----HTQTDGLHLIAPAGQRHPLMTHC-- 568
            ..:..||                       .||.:.    |: |..::|:.|......:...|  
Mouse   246 QNLKVLPPSLPTMPALTSLPSSTDKPSGPWRDCLQALEDGHS-TSSIYLVKPENTNRLMQVWCDQ 309

  Fly   569 --TADGWTTVQRRFDGSADFNRSWADYAQGFGAPGGEFWIGNEQLHHLTLDNCSRLQVQMQDIYD 631
              ...|||.:|||.|||.:|.|:|..|.||||...||:|:|.|.::.||.....:|.|.|:|...
Mouse   310 RHDPGGWTVIQRRLDGSVNFFRNWETYKQGFGNIDGEYWLGLENIYWLTNQGNYKLLVTMEDWSG 374

  Fly   632 NVWVAEYKRFYISSRADGYRLHIAEYSGNASDALNYQQGMQFSAIDDDRDISQTHCAANYEGGWW 696
            ....|||..|.:...::.|:|.:..|.|||.|:..:..|.||:.:|.|.|:...:||...:||||
Mouse   375 RKVFAEYASFRLEPESEYYKLRLGRYHGNAGDSFTWHNGKQFTTLDRDHDVYTGNCAHYQKGGWW 439

  Fly   697 FSHCQHANLNG----------RYNLGLTWFDAARNEWIAVKSSRMLVKRLP 737
            ::.|.|:||||          ||..|:.|.: .|....::|...|:::..|
Mouse   440 YNACAHSNLNGVWYRGGHYRSRYQDGVYWAE-FRGGSYSLKKVVMMIRPNP 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaNP_476710.2 PRK13923 <200..300 CDD:276343
FBG 538..736 CDD:214548 73/238 (31%)
Angptl2NP_036053.2 t_SNARE 156..>206 CDD:197699 12/50 (24%)
FReD 273..487 CDD:238040 71/215 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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