DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment sca and T15B7.1

DIOPT Version :9

Sequence 1:	NP_476710.2	Gene:	sca / 36411	FlyBaseID:	FBgn0003326	Length:	799	Species:	Drosophila melanogaster
Sequence 2:	NP_504743.3	Gene:	T15B7.1 / 188512	WormBaseID:	WBGene00020516	Length:	372	Species:	Caenorhabditis elegans

Alignment Length:	193	Identity:	62/193 - (32%)
Similarity:	83/193 - (43%)	Gaps:	27/193 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly   572 GWTTVQRRFDGSADF-NRSWADYAQGFG--APGGEFWIGNEQLHHLTLDNCSRLQVQMQ-DIYDN 632
            ||...|.|||.|..: :|.|.:|..|||  .....||:|||.||.:|.:....|:|:|. |...|
Worm   181 GWVLFQNRFDDSESYWDRKWDEYKNGFGDVDENSNFWLGNEALHVMTTNKKVTLRVEMYGDRTPN 245

  Fly   633 ------VWVAEYKRFYISSRADGYRL-----HIAEYSGNASDA---LNYQQGMQFSAIDDDRDIS 683
                  .|...|..|.:.|:...|.|     ..|...||||.|   |....|..||.||:..| .
Worm   246 SKNATDFWFGHYFDFQVGSKTQNYPLLDLTMDWANPIGNASTAWYDLTCSIGSPFSTIDNIHD-P 309

  Fly   684 QTHCAANYE-GGWWFSHCQHANLNGRY-------NLGLTWFDAARNEWIAVKSSRMLVKRLPA 738
            ...|...:: ||||..:|..:.|||.|       ..|:.|.....:..:..|.:|||::...|
Worm   310 VKECVTKFQMGGWWLKNCALSTLNGAYTPKDWNNGYGMFWIWDGSDTILHPKKTRMLLRNTVA 372

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
sca	NP_476710.2	PRK13923	<200..300	CDD:276343
sca	NP_476710.2	FBG	538..736	CDD:214548	61/189 (32%)
T15B7.1	NP_504743.3	CLECT	21..138	CDD:214480
T15B7.1	NP_504743.3	FReD	144..368	CDD:294064	61/187 (33%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG2579
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm14151
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.900