DRSC/TRiP Functional Genomics Resources

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Protein Alignment sca and Angptl2

DIOPT Version :10

Sequence 1:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_598253.2 Gene:Angptl2 / 171100 RGDID:620004 Length:493 Species:Rattus norvegicus


Alignment Length:441 Identity:120/441 - (27%)
Similarity:191/441 - (43%) Gaps:75/441 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 VEQHRIANA---NFNLSSQIASLDKLHTSMLELLEDVEGLQTKMDKSIPELRHEISKLEFANAQI 422
            |.|.|:..|   | :...::...:::|...||||.: |.|:.|  :.|..|:    :|...:..|
  Rat    60 VPQQRVTGAICVN-SKEPEVHLENRVHKQELELLNN-ELLKQK--RQIETLQ----QLVEVDGGI 116

  Fly   423 TSEQSLIREEGTNA-ARSLQAMAVSVSVLQEEREGMRKLSANVDQ-LRTNVDRLQ--SLVNDEMK 483
            .||..|:|:|..|. :|..|.....:..:..:|:...:||...:: |....|.||  |...| ::
  Rat   117 VSEVKLLRKESRNMNSRVTQLYMQLLHEIIRKRDNALELSQLENRILNQTADMLQLASKYKD-LE 180

  Fly   484 NKLTHLNK-PHKR--------PHHQNVQAQMPQDDSP-------IDSVLAETLVSELENVETQYE 532
            :|..||.. .|.:        .|.|.|.|..|....|       ........:::::...|.|.:
  Rat   181 HKFQHLAMLAHNQSEVIAQLEEHCQRVPAARPVPQPPPATPPRVYQPPTYNRIINQISTNEIQSD 245

  Fly   533 AIINKLP-----------------------HDCSEV----HTQTDGLHLIAPAGQRHPLMTHC-- 568
            ..:..||                       .||.:.    |: |..::|:.|......:...|  
  Rat   246 QNLKVLPPSLPTMPALTSLPSSTDKPSGPWRDCLQALEDGHS-TSSIYLVKPENTNRLMQVWCDQ 309

  Fly   569 --TADGWTTVQRRFDGSADFNRSWADYAQGFGAPGGEFWIGNEQLHHLTLDNCSRLQVQMQDIYD 631
              ...|||.:|||.|||.:|.|:|..|.||||...||:|:|.|.::.||.....:|.|.|:|...
  Rat   310 RHDPGGWTVIQRRLDGSVNFFRNWETYKQGFGNIDGEYWLGLENIYWLTNQGNYKLLVTMEDWSG 374

  Fly   632 NVWVAEYKRFYISSRADGYRLHIAEYSGNASDALNYQQGMQFSAIDDDRDISQTHCAANYEGGWW 696
            ....|||..|.:...::.|:|.:..|.|||.|:..:..|.||:.:|.|.|:...:||...:||||
  Rat   375 RKVFAEYASFRLEPESEYYKLRLGRYHGNAGDSFTWHNGKQFTTLDRDHDVYTGNCAHYQKGGWW 439

  Fly   697 FSHCQHANLNG----------RYNLGLTWFDAARNEWIAVKSSRMLVKRLP 737
            ::.|.|:||||          ||..|:.|.: .|....::|...|:::..|
  Rat   440 YNACAHSNLNGVWYRGGHYRSRYQDGVYWAE-FRGGSYSLKKVVMMIRPNP 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaNP_476710.2 PRK03918 134..>485 CDD:235175 34/130 (26%)
FBG 538..736 CDD:214548 73/238 (31%)
Angptl2NP_598253.2 t_SNARE 156..>206 CDD:197699 12/50 (24%)
FReD 273..487 CDD:238040 71/215 (33%)

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