DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sca and Fgl2

DIOPT Version :9

Sequence 1:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_032039.2 Gene:Fgl2 / 14190 MGIID:103266 Length:432 Species:Mus musculus


Alignment Length:445 Identity:107/445 - (24%)
Similarity:181/445 - (40%) Gaps:109/445 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 VEQHRIANANFNLSSQIASLDKLHTSMLELLEDVEGLQTKMDKSIPELRHEISKLEFANAQITSE 425
            ||:|.:.....:.|:|.|...:|..|     ...||.|.....::|.|..::.:...:..::..|
Mouse    20 VEEHNLTEGLEDASAQAACPARLEGS-----GRCEGSQCPFQLTLPTLTIQLPRQLGSMEEVLKE 79

  Fly   426 QSLIREEGTNAARSLQ-------------------AMAVSVSVLQEEREGMRKLSANV----DQL 467
            ...::|...:..:|.|                   |.....|.:||....:.|||:.:    ||:
Mouse    80 VRTLKEAVDSLKKSCQDCKLQADDHRDPGGNGGNGAETAEDSRVQELESQVNKLSSELKNAKDQI 144

  Fly   468 RTNVDRLQSL-------VNDEMKNKLTHL--------NKPHKRPHHQNVQAQMPQDDSPIDSVLA 517
            :....||::|       :.:.:.||:.:|        .|..|.|..:::|:|      |:..::.
Mouse   145 QGLQGRLETLHLVNMNNIENYVDNKVANLTVVVNSLDGKCSKCPSQEHMQSQ------PVQHLIY 203

  Fly   518 ETLVSELENVETQYEAIINKLPHDCSEVHT---QTDGLHLIAPAGQRHPLMTHCTAD----GWTT 575
            :                      |||:.:.   ::.|.:.:.|..:......:|..:    |||.
Mouse   204 K----------------------DCSDHYVLGRRSSGAYRVTPDHRNSSFEVYCDMETMGGGWTV 246

  Fly   576 VQRRFDGSADFNRSWADYAQGFGAPGGEFWIGNEQLHHLTLDNCSRLQVQMQDIYDNVWVAEYKR 640
            :|.|.|||.:|.|.|.||..|||....|||:||:::|.||......|::.::|.......|.|.:
Mouse   247 LQARLDGSTNFTREWKDYKAGFGNLEREFWLGNDKIHLLTKSKEMILRIDLEDFNGLTLYALYDQ 311

  Fly   641 FYISSRADGYRLHIAEYSGNASDALNYQQGMQ-----FSAIDDDRD-ISQTHCAANYEGGWWFSH 699
            ||:::....|||||..|:|.|.|||.:.:...     |:..|.|.| ....:|...|..||||..
Mouse   312 FYVANEFLKYRLHIGNYNGTAGDALRFSRHYNHDLRFFTTPDRDNDRYPSGNCGLYYSSGWWFDS 376

  Fly   700 CQHANLNGRY--------NLGLTWFDAARNEWIAV------------KSSRMLVK 734
            |..|||||:|        ..|:.|     ..|..:            |.::|:::
Mouse   377 CLSANLNGKYYHQKYKGVRNGIFW-----GTWPGINQAQPGGYKSSFKQAKMMIR 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaNP_476710.2 PRK13923 <200..300 CDD:276343
FBG 538..736 CDD:214548 69/230 (30%)
Fgl2NP_032039.2 Uds1 72..151 CDD:292096 13/78 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..122 1/21 (5%)
Fibrinogen_C 202..428 CDD:278572 69/252 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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