DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sca and Angpt2

DIOPT Version :9

Sequence 1:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_031452.2 Gene:Angpt2 / 11601 MGIID:1202890 Length:496 Species:Mus musculus


Alignment Length:468 Identity:126/468 - (26%)
Similarity:210/468 - (44%) Gaps:105/468 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 EQIHQLQLAQRNLRRQVNGLR--FHHIDERVRS--IEVEQHRIANANFNLSSQIASLDKLHTSML 388
            :.:.:||:.:..|......|.  .::|.:.::.  :|::|:.:.|       |.|.:.::.||:|
Mouse    75 DSVQRLQVLENILENNTQWLMKLENYIQDNMKKEMVEIQQNVVQN-------QTAVMIEIGTSLL 132

  Fly   389 -------ELLEDVEG-------------LQ-----TKMDKSIPELRHEISKLEFANAQITSEQSL 428
                   ..|.|||.             ||     .|::|.|.:...||:||:..|:.:  ||.:
Mouse   133 NQTAAQTRKLTDVEAQVLNQTTRLELQLLQHSISTNKLEKQILDQTSEINKLQNKNSFL--EQKV 195

  Fly   429 IREEGTNAARSLQAMAVSVSVLQEEREGMRKLSANVDQLRTNVDRLQSLVNDEMKNKLTHLNKPH 493
            :..||.: :..||:|       :|::          |:|:..|.: ||.|.||::.||.....  
Mouse   196 LDMEGKH-SEQLQSM-------KEQK----------DELQVLVSK-QSSVIDELEKKLVTATV-- 239

  Fly   494 KRPHHQNVQAQMPQDDSPIDSVLAET---LVSELENVETQYEAIINKLP----HDCSEVHTQ--- 548
                 .|...|..|.|      |.||   |::.:.:..::....|.|..    .||:|:...   
Mouse   240 -----NNSLLQKQQHD------LMETVNSLLTMMSSPNSKSSVAIRKEEQTTFRDCAEIFKSGLT 293

  Fly   549 TDGLHLIAPAGQRHPLMTHCTAD----GWTTVQRRFDGSADFNRSWADYAQGFGAPGGEFWIGNE 609
            |.|::.:........:..:|..|    |||.:|.|.|||.||.|:|.:|.:|||:|.||:|:|||
Mouse   294 TSGIYTLTFPNSTEEIKAYCDMDVGGGGWTVIQHREDGSVDFQRTWKEYKEGFGSPLGEYWLGNE 358

  Fly   610 QLHHLTLDNCSRLQVQMQDIYDNVWVAEYKRFYISSRADGYRLHIAEYSGNASDALNYQQ-GMQF 673
            .:..||..:...|::|::|...|...:.|..||::.....||:|:...:|.|....:..| |..|
Mouse   359 FVSQLTGQHRYVLKIQLKDWEGNEAHSLYDHFYLAGEESNYRIHLTGLTGTAGKISSISQPGSDF 423

  Fly   674 SAIDDDRDISQTHCAANYEGGWWFSHCQHANLNGRY-----NL----GLTWFDAARNEW----IA 725
            |..|.|.|.....|:....|||||..|..:||||:|     |.    |:.|:     .|    .:
Mouse   424 STKDSDNDKCICKCSQMLSGGWWFDACGPSNLNGQYYPQKQNTNKFNGIKWY-----YWKGSGYS 483

  Fly   726 VKSSRMLVKRLPA 738
            :|::.|:::  ||
Mouse   484 LKATTMMIR--PA 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaNP_476710.2 PRK13923 <200..300 CDD:276343
FBG 538..736 CDD:214548 69/222 (31%)
Angpt2NP_031452.2 RILP-like <168..226 CDD:304877 21/78 (27%)
FBG 280..494 CDD:214548 69/220 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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