DRSC/TRiP Functional Genomics Resources

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Protein Alignment sca and angpt1

DIOPT Version :10

Sequence 1:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_571888.1 Gene:angpt1 / 114407 ZFINID:ZDB-GENE-010817-1 Length:513 Species:Danio rerio


Alignment Length:512 Identity:117/512 - (22%)
Similarity:221/512 - (43%) Gaps:112/512 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 RSSTFEDLATIRSDYQQLKLDLAAQRERQQQTEVYVQELREEMLQQEQDF-----QHALVKLQQR 286
            :|.|..:...::.|..|.:.||:.|:.:|.:   :|.|...:.||:.:::     :..:|:|||.
Zfish    68 KSGTAYNANALQRDAPQPEADLSNQKIQQLE---HVMENYTQWLQKIENYIKDNMKTEMVQLQQS 129

  Fly   287 TRKDGSSASVEEESGSQEANQEQTGLETTADHKRRHCRFQSEQIHQLQLAQRNLRRQVNGLRFHH 351
            ...:.::|.:  |.|:...:|                  .:||..:|...:..:..|.:.|....
Zfish   130 AVHNHTAAML--EMGTSLLSQ------------------TAEQTRKLTDVETQVLNQTSRLEIQL 174

  Fly   352 IDERVRSIEVEQHRIANANFNLSSQIASLDKLHTSMLELLEDVEGLQTKMDKSIPELRHEISKLE 416
            ::..:.:.::|:        .|..||..::|:|.....|.|.::.|:.:..:.:..||.|.|.|:
Zfish   175 LENSLSTNKLEK--------QLMIQINEINKIHDKNGFLEEKMQELEDRHRQELESLRTEKSDLQ 231

  Fly   417 FANAQITSEQSLIREEGTNAARSLQAMAVSVSVLQEEREGMRKLSANVDQLRTNVDRLQSLVNDE 481
               |.::.:.|:|||.....:|:    ..:.:.||.:::.:             ::.::||:   
Zfish   232 ---ALVSRQSSVIRELENQLSRA----TGNSTALQRQQQDL-------------MESMRSLL--- 273

  Fly   482 MKNKLTHLNKPHKRPHHQNVQAQMPQDDSPIDSVLAETLVSELENVETQYEAIINKLPHDCSEVH 546
                                            |:.|:...:.:|...|: :|...:...||::::
Zfish   274 --------------------------------SLCAKDAATAVEPNSTK-QADEERKFRDCADLY 305

  Fly   547 T---QTDGLHLIAPAGQRHPLMTHCTAD----GWTTVQRRFDGSADFNRSWADYAQGFGAPGGEF 604
            .   |.:|::.|..:.| .....:|..:    |||.:|:|.||:.||.::|.:|..|||:..||.
Zfish   306 QAGFQKNGVYTINISPQ-ETKKVYCVMESAGGGWTVIQKREDGTVDFQKTWKEYKMGFGSVSGEH 369

  Fly   605 WIGNEQLHHLTLDNCSRLQVQMQDIYDNVWVAEYKRFYISSRADGYRLHIAEYSGNASDALNYQ- 668
            |:|||.:|.||......|:|::.|...:...::|..|:|.|....|||.:..:||.|....:.. 
Zfish   370 WLGNEFVHVLTNQRQHGLRVELSDWDGHQAFSQYDSFHIDSEKQKYRLFLKTHSGTAGRQSSLAV 434

  Fly   669 QGMQFSAIDDDRDISQTHCAANYEGGWWFSHCQHANLN----------GRYNLGLTW 715
            .|..||..|.|.|.....||....||||:..|..:|||          |::| |:.|
Zfish   435 HGADFSTKDVDNDNCTCKCALMLSGGWWYDACGPSNLNGVYYRQGQHVGKFN-GIKW 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaNP_476710.2 PRK03918 134..>485 CDD:235175 49/262 (19%)
FBG 538..736 CDD:214548 63/196 (32%)
angpt1NP_571888.1 SMC_N <77..289 CDD:481474 50/297 (17%)
FReD 298..508 CDD:238040 63/195 (32%)

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