DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sca and angpt2a

DIOPT Version :9

Sequence 1:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_001265754.1 Gene:angpt2a / 101101687 ZFINID:ZDB-GENE-121101-1 Length:488 Species:Danio rerio


Alignment Length:525 Identity:119/525 - (22%)
Similarity:215/525 - (40%) Gaps:139/525 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 QQLKLDLAAQRERQQQTEVYVQE-LREEMLQ-QEQDFQHALVKLQQRTRKDGSSASVEEESGSQE 304
            :||:..:....:..|:.|.|::| |:::|:| |....|:..|.:    .|.|:|.          
Zfish    73 EQLESIIENNTQWLQKLENYIEENLKQDMVQIQNNAVQNHTVTM----IKIGTSL---------- 123

  Fly   305 ANQEQTGLETTADHKRRHCRFQSEQIHQLQLAQRNLRRQVNGLRFHHIDERVRSIEVEQHRIANA 369
                   |..||:..|:....:::.|:|....:|.|           ::..:.:.::|:..:   
Zfish   124 -------LSQTAEQSRKITTVEAQVINQTTRIERQL-----------LENSISTSKLEKEFL--- 167

  Fly   370 NFNLSSQIASLDKL--HTSMLEL-LEDVEGLQTKMDKSIPELRHEISKLEFANAQITSEQSLIRE 431
                 .||..::||  ..|.||. :||:||.:....:::.|.:.|:.||                
Zfish   168 -----QQINEINKLKEKNSFLEKGIEDMEGKRNTELETLKEEKEELKKL---------------- 211

  Fly   432 EGTNAARSLQAMAVSVSVLQEEREGMRKLSANVDQLRTNVDRLQSLVNDEMKN-KLTHLNKPHKR 495
                       :.:...|::|..:.:...|::...::.....|.:.||:.::. .:|        
Zfish   212 -----------VEMLAKVIKEMEQQVSSTSSDNTAMKQQQQELTNTVNNLIQTISVT-------- 257

  Fly   496 PHHQNVQAQMPQDDSPIDSVLAETLVSELENVETQYEAIINKLPHDCSEVHTQ---TDGLHLIAP 557
              .|...:.|.||:.  |.::                        ||:.|..|   ..|::.:..
Zfish   258 --RQGSNSAMMQDNP--DQLI------------------------DCAVVFKQGNKKSGVYSLTI 294

  Fly   558 AGQRHPLMTHC----TADGWTTVQRRFDGSADFNRSWADYAQGFGAPGGEFWIGNEQLHHLTLDN 618
            .|.:.....:|    ...|||.:|:||:|..||:::|.:|..|||...||.|:|||.:..||.:.
Zfish   295 PGTKQQFKAYCDMGTDGGGWTVIQKRFNGLVDFHQTWKNYTMGFGDISGEHWLGNEIISKLTQEK 359

  Fly   619 CSRLQVQMQDIYDNVWVAEYKRFYISSRADGYRLHIAEYSGNASDALNY-QQGMQFSAIDDDRDI 682
            ...|::.:.|...|...::|.:|.:......||:.:..|||.|....:. |.|..|||.|.|.|.
Zfish   360 QHTLRIDLMDWEGNTAFSKYSQFSLDGEKQNYRISLNGYSGTAGRTSSMGQTGGDFSAKDLDNDK 424

  Fly   683 SQTHCAANYEGGWWFSHCQHANLNG----------RYNLGLTWFDAARNEW----IAVKSSRMLV 733
            ....|:....|||||..|..:||||          |:| |:.|:     .|    .::|::.|::
Zfish   425 CVCKCSQMLSGGWWFDACGPSNLNGIYYQQGQNTNRFN-GIKWY-----YWKGSAYSLKATTMMI 483

  Fly   734 KRLPA 738
            :  ||
Zfish   484 R--PA 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaNP_476710.2 PRK13923 <200..300 CDD:276343 15/59 (25%)
FBG 538..736 CDD:214548 66/219 (30%)
angpt2aNP_001265754.1 FReD 275..485 CDD:238040 66/217 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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