DRSC/TRiP Functional Genomics Resources

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Protein Alignment sca and LOC100485772

DIOPT Version :10

Sequence 1:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster
Sequence 2:XP_031752582.1 Gene:LOC100485772 / 100485772 XenbaseID:XB-GENE-29077987 Length:244 Species:Xenopus tropicalis


Alignment Length:217 Identity:69/217 - (31%)
Similarity:108/217 - (49%) Gaps:20/217 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   537 KLPHDCSEV-HTQTDGLHLIAPAGQRHPLMTHCT----ADGWTTVQRR-FDGSADFNRSWADYAQ 595
            |||.||||: ..:..|:::|.|.| .|||:.:|.    :.||..||.. |:....::.||..|..
 Frog    32 KLPRDCSEIPRNKESGVYVIYPEG-IHPLVVNCDMTTYSGGWIVVQHNSFNSEITWDESWTTYKY 95

  Fly   596 GFGAPGGEFWIGNEQLHHLTLDNCSRLQVQMQDIYDNVWVAEYKRFYISSRADGYRLHIAEYSGN 660
            |||....::|:|.|.|||::.....:::..:.|..:....|:|..|.:...|.||.|.:..|.|.
 Frog    96 GFGNVEKDYWLGVEYLHHISKQKVYQVRFVIHDNNNEEKYADYNLFSVEDEAHGYTLRLGSYRGT 160

  Fly   661 ASDALNYQQ------GMQFSAIDDDRDISQTHCAANYEGGWWFSHCQHANLNGRYNLGLTWFDAA 719
            |.||::..|      .|:|:..|.|.||...:||.:|.|.||::.|..:.||.:..:..|...|.
 Frog   161 AGDAMSSIQAGTTHDNMKFTTKDKDHDIYSANCATSYGGAWWYAACFASKLNNKNAIHWTGLCAG 225

  Fly   720 RNEWIAVKSSRMLVKRLPAVEC 741
            .     .|:|.:|::  ||..|
 Frog   226 N-----CKASAILIR--PADYC 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaNP_476710.2 PRK03918 134..>485 CDD:235175
FBG 538..736 CDD:214548 65/209 (31%)
LOC100485772XP_031752582.1 FReD 32..212 CDD:238040 59/180 (33%)
Blue background indicates that the domain is not in the aligned region.

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