DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sca and mfap4.5

DIOPT Version :10

Sequence 1:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster
Sequence 2:NP_001315007.1 Gene:mfap4.5 / 100007488 ZFINID:ZDB-GENE-121214-133 Length:245 Species:Danio rerio


Alignment Length:220 Identity:72/220 - (32%)
Similarity:113/220 - (51%) Gaps:24/220 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   539 PHDCSEVH---TQTDGLHLIAPAGQRHPLMTHC---------TADGWTTVQRRFDGSADFNRSWA 591
            |.|||:::   ....|::.|.|||. .|:..:|         ...|||.:|||.|||.:|.|.|.
Zfish    27 PFDCSDIYKSGQNLSGIYSIYPAGD-FPVWVYCQMVSEGKDEDKGGWTVIQRRMDGSVNFYRPWR 90

  Fly   592 DYAQGFGAPGGEFWIGNEQLHHLTLDNCSRLQVQMQDIYDNVWVAEYKRFYISSRADGYRLHIAE 656
            ||.:|||...||:|:|.|.|:.||......|:|.::|.......|:|..|.:....:||:|.::.
Zfish    91 DYKRGFGKVEGEYWLGLENLYQLTRHKKFMLRVDLEDFEGRRGFAQYSSFSVGCECEGYKLQVSG 155

  Fly   657 YS-GNASDALNYQQGMQFSAIDDDRDISQTHCAANYEGGWWFSHCQHANLNG---------RYNL 711
            :: |.|.|.|:....::||..|.|:|..:..||..|.||:|:..|.:.|.||         .|.:
Zfish   156 FTDGGAGDCLSGHNDLKFSTFDKDQDTHEKSCAKEYLGGFWYGSCHNTNPNGVYLWGEDPTHYAI 220

  Fly   712 GLTWFDAARNEWIAVKSSRMLVKRL 736
            |:.| ...:|..:::|:..|.:||:
Zfish   221 GVCW-STWKNYAVSMKTFSMKIKRV 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaNP_476710.2 PRK03918 134..>485 CDD:235175
FBG 538..736 CDD:214548 71/218 (33%)
mfap4.5NP_001315007.1 FReD 25..244 CDD:238040 71/218 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.