Protein Alignment Nacalpha and Hmr

DIOPT Version :10

• Sequence 1: NP_477216.1
• Gene: Nacalpha / 36409
• FlyBaseID: FBgn0086904
• Length: 217
• Species: Drosophila melanogaster
• Sequence 2: NP_572637.2
• Gene: Hmr / 31988
• FlyBaseID: FBgn0001206
• Length: 1413
• Species: Drosophila melanogaster
• Alignment Length: 163
• Identity: 34/163 - (20%)
• Similarity: 56/163 - (34%)
• Gaps: 43/163 - (26%)

  Fly    19 AKPEDVRVEDDGSDSDSDGGMPGLEEAVAATTQLGGGATGLPIDLVSKAKQSRGEKKARKIMLKL 83
            ||...|......|.||       ::...||:..||.....||:..::.... ..:....::.:..
  Fly   830 AKLPTVAKATTASQSD-------IKATAAASATLGSQPENLPLGNITVCLH-ESDTTGNELQVWC 886

  Fly    84 GLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQQAQVAA--------- 139
            | .|....|...||.:..|..|:..|.::|                   :..|:||
  Fly   887 G-NQGTRFNLNMIRTTTLIREVMAVPQLHK-------------------EDPQLAAKCVEFWHFI 931

  Fly   140 AEKFKAPEAA------GAADSVGATTSVAPIAE 166
            |:||..||.|      ..|.::.....:||::|
  Fly   932 AKKFHMPEEALRACWKFLAANMSVFPKIAPMSE 964

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nacalpha	NP_477216.1	NAC_NACA	84..131	CDD:409233	9/46 (20%)
		UBA_NAC_euk	179..215	CDD:270541
Hmr	NP_572637.2	MADF_DNA_bdg	59..149	CDD:463144
		GT1	213..295	CDD:474047
		PHA03247	<474..864	CDD:223021	10/40 (25%)