DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nacalpha and icd-2

DIOPT Version :9

Sequence 1:NP_001286363.1 Gene:Nacalpha / 36409 FlyBaseID:FBgn0086904 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_490749.1 Gene:icd-2 / 171646 WormBaseID:WBGene00022042 Length:195 Species:Caenorhabditis elegans


Alignment Length:202 Identity:113/202 - (55%)
Similarity:137/202 - (67%) Gaps:20/202 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EAKPEDVRVEDDGSDSDSDGGMPGLEEAVAATTQLGGGATGLPIDLVSKAKQSRGEKKARKIMLK 82
            |.|...|.|.|| ||:::      :|:.:....:....|.||...:..:|||||.||||||:..|
 Worm    11 EVKEPQVDVSDD-SDNEA------VEQELTEEQRRVAEAAGLGDHIDKQAKQSRSEKKARKLFSK 68

  Fly    83 LGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQQAQVAAAEKFKAPE 147
            |||||:.||:||.||||||||||||.|||:|:|.|||||:|||||||||:|.||::|.|..|...
 Worm    69 LGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIEDLTQHAQMSAIENLKPTR 133

  Fly   148 AAGAADSVGATTSVAPIAEEDE-EDV--DDTGVDEKDIELVITQANTTRAKAIKALKNNNNDIVN 209
            .|....:|          |||| |||  |.||::||||||||:||||||.|||:|||..:|||||
 Worm   134 EAPQLKTV----------EEDENEDVEEDSTGIEEKDIELVISQANTTRNKAIRALKEADNDIVN 188

  Fly   210 AIMELTM 216
            |||.|||
 Worm   189 AIMSLTM 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NacalphaNP_001286363.1 EGD2 74..216 CDD:224227 93/144 (65%)
NAC 75..128 CDD:280093 40/52 (77%)
UBA_NAC_euk 179..215 CDD:270541 28/35 (80%)
icd-2NP_490749.1 NAC_NACA 70..117 CDD:409233 37/46 (80%)
UBA_NAC_euk 158..194 CDD:270541 28/35 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 92 1.000 Domainoid score I4841
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 187 1.000 Inparanoid score I2598
Isobase 1 0.950 - 0 Normalized mean entropy S811
OMA 1 1.010 - - QHG53634
OrthoDB 1 1.010 - - D1331328at2759
OrthoFinder 1 1.000 - - FOG0000996
OrthoInspector 1 1.000 - - oto19225
orthoMCL 1 0.900 - - OOG6_101216
Panther 1 1.100 - - LDO PTHR21713
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R789
SonicParanoid 1 1.000 - - X2513
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.960

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