DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nacalpha and nacad

DIOPT Version :10

Sequence 1:NP_477216.1 Gene:Nacalpha / 36409 FlyBaseID:FBgn0086904 Length:217 Species:Drosophila melanogaster
Sequence 2:XP_012819673.1 Gene:nacad / 100127557 XenbaseID:XB-GENE-5961006 Length:1937 Species:Xenopus tropicalis


Alignment Length:231 Identity:118/231 - (51%)
Similarity:149/231 - (64%) Gaps:18/231 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PELTEIKSEAAPSTSAEAKP-------EDVRVEDDGSDSDS-DGGMPGLEEAVAATTQLGGGATG 58
            ||:..::..:|.:.....||       |.:......:|::| |..:|.|||......:.......
 Frog  1709 PEMHSLRETSAVTLLGITKPGPRQRGCESLSHRGSCNDTESNDESLPELEEPDVTEPRTSSSQNQ 1773

  Fly    59 LP------IDLVSKAKQSRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHS 117
            |.      .:.:|||||||.||||||.|.||||:||.||.|:||||||||||||..|||:|:|.|
 Frog  1774 LAHCVAPGEESISKAKQSRSEKKARKAMSKLGLRQIHGVTRITIRKSKNILFVITKPDVFKSPAS 1838

  Fly   118 DTYIVFGEAKIEDLSQQAQVAAAEKFKAPEAAGAADSVGATTSVAPIAE--EDEEDVDDTGVDEK 180
            |.|||||||||||||||...|||||||.|  ...:..:..||....|.|  |:||:||:||::.:
 Frog  1839 DIYIVFGEAKIEDLSQQVHKAAAEKFKVP--MEHSPLITETTPTLTIKEESEEEEEVDETGLEVR 1901

  Fly   181 DIELVITQANTTRAKAIKALKNNNNDIVNAIMELTM 216
            |||||:.|||.:||||::||::||||||||||||||
 Frog  1902 DIELVMAQANVSRAKAVRALRHNNNDIVNAIMELTM 1937

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NacalphaNP_477216.1 NAC_NACA 84..131 CDD:409233 36/46 (78%)
UBA_NAC_euk 179..215 CDD:270541 25/35 (71%)
nacadXP_012819673.1 MSCRAMM_ClfA <532..900 CDD:468110
NAC_NACA 1805..1852 CDD:409233 36/46 (78%)
UBA_NACAD 1894..1937 CDD:270599 29/42 (69%)
Blue background indicates that the domain is not in the aligned region.

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