DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL18 and mrpl18

DIOPT Version :10

Sequence 1:NP_610818.1 Gene:mRpL18 / 36406 FlyBaseID:FBgn0026741 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001070798.1 Gene:mrpl18 / 768187 ZFINID:ZDB-GENE-061013-632 Length:191 Species:Danio rerio


Alignment Length:132 Identity:47/132 - (35%)
Similarity:74/132 - (56%) Gaps:7/132 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 INRNPRNLERLRIAYKPVGYHLEKPGRSYWHTLEINTSGRYVSGDVKHFEN-GTILSASTSEWAI 94
            :||||||||::.:|.|..|:....|.|.|:|.|.:..:.::.:.:|...:: ..:||.||:|||:
Zfish    59 VNRNPRNLEQMALAVKDRGWATVWPSRKYYHRLVLRRTQKHTTAEVYSCDSTDPVLSCSTTEWAL 123

  Fly    95 KQQLYKTNDTSAFVNLGRVLAQRCLQSGITEMTCNVEAVP---GSKL-QKLLQTIQDNGVSFKEP 155
            |:||......:|...:|.||||||..:|||.:  ....||   .||. |...:.:::.||...||
Zfish   124 KRQLGSMRSVAACRAVGEVLAQRCCGAGITRL--YYREVPWMFRSKANQSFWRAMKEGGVVLNEP 186

  Fly   156 SR 157
            .:
Zfish   187 KQ 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL18NP_610818.1 Ribosomal_L18_L5e 50..150 CDD:238246 32/104 (31%)
mrpl18NP_001070798.1 Ribosomal_L18_L5e 78..181 CDD:238246 32/104 (31%)

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