DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL18 and mrpl18

DIOPT Version :10

Sequence 1:NP_610818.1 Gene:mRpL18 / 36406 FlyBaseID:FBgn0026741 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_989288.1 Gene:mrpl18 / 394906 XenbaseID:XB-GENE-1005853 Length:175 Species:Xenopus tropicalis


Alignment Length:147 Identity:62/147 - (42%)
Similarity:80/147 - (54%) Gaps:17/147 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ELTTPQASTEYVINRNPRNLERLRIAYKPVGYHLEKPGRSYWHTLEINTSGRYVSGDVKHFENGT 83
            ||..|.     .:||||||:|.|.:|.|..|:....|.|.|||.|....|..:||..|:|.....
 Frog    37 ELVNPN-----FVNRNPRNMECLALAVKDRGWGTVWPTRQYWHRLRFERSQHHVSAFVEHSNGNV 96

  Fly    84 ILSASTSEWAIKQQLYKTNDTSAFVNLGRVLAQRCLQSGITEM-------TCNVEAVPGSKLQKL 141
            |:||||.|||:|:.||.|.|..|..|:|||||||||::||:.|       |...|||     |:.
 Frog    97 IVSASTREWAVKRHLYSTKDVMACENIGRVLAQRCLEAGISYMIFREIPWTFRSEAV-----QRF 156

  Fly   142 LQTIQDNGVSFKEPSRL 158
            ...:::.||...||.|:
 Frog   157 RNAMKEGGVVLSEPRRI 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL18NP_610818.1 Ribosomal_L18_L5e 50..150 CDD:238246 43/106 (41%)
mrpl18NP_989288.1 Ribosomal_L18_L5e 63..165 CDD:238246 43/106 (41%)

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