DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL18 and mRpL18

DIOPT Version :10

Sequence 1:NP_610818.1 Gene:mRpL18 / 36406 FlyBaseID:FBgn0026741 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_554644.2 Gene:mRpL18 / 3289841 VectorBaseID:AGAMI1_001107 Length:172 Species:Anopheles gambiae


Alignment Length:177 Identity:85/177 - (48%)
Similarity:121/177 - (68%) Gaps:5/177 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRSARPLTSARVLHKIKELTTPQASTEYVINRNPRNLERLRIAYKPVGYHLEKPGRSYWHTLEI 65
            |:.||:     ::..||::.......|.||:|||||||||||:|||..|||||:|.|::||.||:
Mosquito     1 MAGSAK-----QIFSKIQQTNNVSKGTLYVVNRNPRNLERLRLAYKVDGYHLERPVRNFWHRLEL 60

  Fly    66 NTSGRYVSGDVKHFENGTILSASTSEWAIKQQLYKTNDTSAFVNLGRVLAQRCLQSGITEMTCNV 130
            |.|.:||:..:.|||||.::..||:|||:|:.|||.||.:||:.||:|.|.|||.:|:||:.|:.
Mosquito    61 NASKKYVTAKLVHFENGPVIECSTNEWALKRHLYKGNDFTAFITLGKVFASRCLDAGLTEVRCDF 125

  Fly   131 EAVPGSKLQKLLQTIQDNGVSFKEPSRLPNEQPWDEKRHEKPWEVSE 177
            ....|.|:...|:|::::|:..|||:|:.....||..|.||||||.|
Mosquito   126 IPSTGKKVDLFLRTVEESGICLKEPNRIRPAYSWDMHRPEKPWEVME 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL18NP_610818.1 Ribosomal_L18_L5e 50..150 CDD:238246 47/99 (47%)
mRpL18XP_554644.2 None

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