DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL18 and Mrpl18

DIOPT Version :10

Sequence 1:NP_610818.1 Gene:mRpL18 / 36406 FlyBaseID:FBgn0026741 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001099675.1 Gene:Mrpl18 / 292244 RGDID:1306387 Length:180 Species:Rattus norvegicus


Alignment Length:162 Identity:60/162 - (37%)
Similarity:87/162 - (53%) Gaps:11/162 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRSARPLTSARVLHKIKELTTPQASTEYVINRNPRNLERLRIAYKPVGYHLEKPGRSYWHTLEI 65
            :|.|:.|.....|..|..|...|:     .|||||||||.|.:|.|..|:....|.|.:||.|.:
  Rat    24 LSTSSTPAVQPDVETKENEAVAPE-----FINRNPRNLELLGVARKERGWATVWPNREFWHRLRV 83

  Fly    66 NTSGRYVSGDVKHFENGTILSASTSEWAIKQQLYKTNDTSAFVNLGRVLAQRCLQSGITEMTCNV 130
            ..:..:|...|:|.....::||||.|||||:.||.|.:..|..::|||||||||::||..|.  .
  Rat    84 VKTQHHVEAFVEHLNGQVVVSASTREWAIKKHLYSTRNVVACESVGRVLAQRCLEAGINFMV--Y 146

  Fly   131 EAVP----GSKLQKLLQTIQDNGVSFKEPSRL 158
            :..|    ...:::|...:.::||..:||.|:
  Rat   147 QPTPWEASSDSIKRLQNAMTESGVMLREPRRV 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL18NP_610818.1 Ribosomal_L18_L5e 50..150 CDD:238246 35/103 (34%)
Mrpl18NP_001099675.1 Ribosomal_L18_L5e 68..170 CDD:238246 35/103 (34%)

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