DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL18 and MRPL18

DIOPT Version :10

Sequence 1:NP_610818.1 Gene:mRpL18 / 36406 FlyBaseID:FBgn0026741 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_054880.2 Gene:MRPL18 / 29074 HGNCID:14477 Length:180 Species:Homo sapiens


Alignment Length:161 Identity:60/161 - (37%)
Similarity:86/161 - (53%) Gaps:9/161 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRSARPLTSARVLHKIKELTTPQASTEYVINRNPRNLERLRIAYKPVGYHLEKPGRSYWHTLEI 65
            :|.|:.|.....|.....|...|:.:     ||||||||.|.:|.|..|:....|.|.:||.|.:
Human    24 LSTSSEPAAKPEVDPVENEAVAPEFT-----NRNPRNLELLSVARKERGWRTVFPSREFWHRLRV 83

  Fly    66 NTSGRYVSGDVKHFENGTILSASTSEWAIKQQLYKTNDTSAFVNLGRVLAQRCLQSGITEMTCNV 130
            ..:..:|...|:|.....::||||.|||||:.||.|.:..|..::|||||||||::||..|....
Human    84 IRTQHHVEALVEHQNGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEAGINFMVYQP 148

  Fly   131 ---EAVPGSKLQKLLQTIQDNGVSFKEPSRL 158
               ||...| :::|...:.:.||..:||.|:
Human   149 TPWEAASDS-MKRLQSAMTEGGVVLREPQRI 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL18NP_610818.1 Ribosomal_L18_L5e 50..150 CDD:238246 37/102 (36%)
MRPL18NP_054880.2 Ribosomal_L18_L5e 68..170 CDD:238246 37/102 (36%)

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