DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mos and LRRK2

DIOPT Version :9

Sequence 1:NP_610817.1 Gene:Mos / 36404 FlyBaseID:FBgn0033773 Length:364 Species:Drosophila melanogaster
Sequence 2:NP_940980.4 Gene:LRRK2 / 120892 HGNCID:18618 Length:2527 Species:Homo sapiens


Alignment Length:368 Identity:80/368 - (21%)
Similarity:148/368 - (40%) Gaps:90/368 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VLGRGAYGTVFKAIYRDRSVAVKIIRAQAASTLHNES--HLLNLEHRNIVRLLKLESAADF--GL 87
            :||.|::|:|::|.|....|||||.....:..|..:.  .|.:|.|.:::.||    ||..  .:
Human  1884 LLGDGSFGSVYRAAYEGEEVAVKIFNKHTSLRLLRQELVVLCHLHHPSLISLL----AAGIRPRM 1944

  Fly    88 VIMECPRGQSLQRIVD----TLALPLMHRVLITLDVVAALRYCHSQNVLHLDVKPTNILV-ALGT 147
            ::||.....||.|::.    :|...|.||  |.|.|...|||.||..:::.|:||.|:|: .|..
Human  1945 LVMELASKGSLDRLLQQDKASLTRTLQHR--IALHVADGLRYLHSAMIIYRDLKPHNVLLFTLYP 2007

  Fly   148 KSSITCNSSKIKVKRSYICKLCDFGSSIEMGEFCAWQEPSVAKGTLRYMSPEALRSDTL-TEASD 211
            .::|             |.|:.|:|    :.::|.......::||..:.:||..|.:.: .:.:|
Human  2008 NAAI-------------IAKIADYG----IAQYCCRMGIKTSEGTPGFRAPEVARGNVIYNQQAD 2055

  Fly   212 IYSLGITMWQLQARRLPYHTLDCNETIAYQVVKHELRPDNYHQLKILA-LDSPID----CDWDLA 271
            :||.|:.::.:.             |...::|:....|:.:.:|:|.. |..|:.    ..|.:.
Human  2056 VYSFGLLLYDIL-------------TTGGRIVEGLKFPNEFDELEIQGKLPDPVKEYGCAPWPMV 2107

  Fly   272 HE-----------------------STANVICRRANTSARRNLSLDPSYTVGRDLKKKR------ 307
            .:                       ::|.::|........:|:.::.......:.:...      
Human  2108 EKLIKQCLKENPQERPTSAQVFDILNSAELVCLTRRILLPKNVIVECMVATHHNSRNASIWLGCG 2172

  Fly   308 HRNRLALHFDSPAPEGSACSESAYSQLY----------KSCWV 340
            |.:|..|.|.....||....|.|.|::.          |..|:
Human  2173 HTDRGQLSFLDLNTEGYTSEEVADSRILCLALVHLPVEKESWI 2215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MosNP_610817.1 STKc_Mos 19..298 CDD:270881 69/308 (22%)
S_TKc 26..257 CDD:214567 62/239 (26%)
LRRK2NP_940980.4 Required for RAB29-mediated activation. /evidence=ECO:0000269|PubMed:29212815 1..969
LRR 1 983..1004
leucine-rich repeat 985..1012 CDD:275380
LRR 1012..>1286 CDD:227223
LRR 2 1012..1033
leucine-rich repeat 1013..1036 CDD:275380
LRR 3 1036..1057
leucine-rich repeat 1037..1084 CDD:275380
LRR 4 1059..1080
LRR 5 1084..1105
leucine-rich repeat 1085..1108 CDD:275380
LRR 6 1108..1129
leucine-rich repeat 1109..1130 CDD:275380
LRR 7 1130..1150
leucine-rich repeat 1131..1174 CDD:275380
LRR 8 1174..1196
leucine-rich repeat 1175..1197 CDD:275380
LRR 9 1197..1218
leucine-rich repeat 1198..1221 CDD:275380
LRR 10 1221..1241
leucine-rich repeat 1222..1246 CDD:275380
LRR 11 1246..1267
leucine-rich repeat 1247..1269 CDD:275380
LRR 12 1269..1291
RocCOR 1334..1507 CDD:206741
COR 1527..1740 CDD:318343
STKc_LRRK2 1884..2135 CDD:270970 66/286 (23%)
WD 1 2139..2183 6/43 (14%)
WD 2 2188..2228 6/28 (21%)
WD 3 2233..2276
WD 4 2281..2327
WD 5 2333..2377
WD 6 2402..2438
WD 7 2443..2497
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0192
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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