DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42663 and Nckap5

DIOPT Version :9

Sequence 1:NP_001188915.1 Gene:CG42663 / 36403 FlyBaseID:FBgn0261545 Length:662 Species:Drosophila melanogaster
Sequence 2:XP_038947097.1 Gene:Nckap5 / 363974 RGDID:1564507 Length:1944 Species:Rattus norvegicus


Alignment Length:938 Identity:176/938 - (18%)
Similarity:289/938 - (30%) Gaps:382/938 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SQGRIQ--LVH------QPRTPVESEAGTLSLERHGGSISGSGGCDKDVLEKRMIEVEGALLRLQ 96
            |||.:|  |:|      |.|...|.....::||.                |:..|:    :|.||
  Rat    65 SQGAMQEKLIHELEEERQLRLQSEERLREVTLES----------------ERNRIQ----MLGLQ 109

  Fly    97 EQFQK----------SQCGSPTFEKELREQIENMNRIMKSKERKQMQTCRDHKALQTRFARQE-S 150
            :||.:          || |||..:||...:|......:..:|||:.....|.:......:|.| |
  Rat   110 QQFSRMEETVRSLLQSQ-GSPEQKKEEPAKITAYQERVSEEERKEQAALGDLRVEADEDSRSEHS 173

  Fly   151 LLQSMQQENRSLLTRIR------------------QYEHCLDDVMRKVVDAIVAEDNLREEVSML 197
            ..:..::::|.||.|::                  |||.|||:|..:||.|::.:.:||||...|
  Rat   174 STEGGKEDSRLLLKRLKALEAENSALALENENQREQYERCLDEVANQVVRALLTQKDLREECVKL 238

  Fly   198 KGRVRDLEAQNAALS---------ASPV--KGRDEGYCTMSSGQPQPSNG--------------- 236
            |.||.|||.||.|||         ||.|  :........:|||......|               
  Rat   239 KTRVFDLEQQNRALSILFQQRVRPASDVLLQKLHSHAIVLSSGDLLSEAGGSQSLTLSWTDIKFH 303

  Fly   237 -HLED----------------LPEEPEQWLLPAEPCSTEMEDWSMSQEELAVMTFDDERDPHHPH 284
             ||::                :|:.|    .|...||        |..||::.:...|......:
  Rat   304 EHLQNAKSGAPALKHSGSGVVIPDHP----CPRNSCS--------SGSELSLSSTCSEYSSGSSY 356

  Fly   285 LQQQRR---KRDHDWLW----------PS-----SDFINSTTVETDSVADGITQLLQQKIVYSED 331
            ..|.|:   ||....:|          ||     :|.:..|.::...:.:|:.:|.::|::....
  Rat   357 TWQDRKLNGKRQTSQIWDKRLSIDSSLPSGFTSPADELPPTRIKESHILEGLRKLQKRKVLLESP 421

  Fly   332 EEVA-------CTDFTNDFYKLVNIRSNS----------SRSLYSYLEGETDDEDEDDDD-GEDS 378
            ..|.       |.:.....|. ..|:::|          .|.:......:|.:.|.:..: ..:.
  Rat   422 ASVMSKWGYKDCMNSNEGIYS-PGIKNSSLKECPPCQSPGRGIPCQNLHQTFNYDANSHEYAHEE 485

  Fly   379 SISESQVGPAGRISP--TPSEAGRAQ-------------------------------------LT 404
            .:|.:        ||  :||:..|.|                                     ||
  Rat   486 FLSSA--------SPRTSPSQGCRIQSSKLTHSVSDSLFTWEPHRKYFAEGTASVYTREMPERLT 542

  Fly   405 SCSS-------------------------------------SETD------ELSASQAKKDEEPD 426
            .|:|                                     |:||      ||....:.:....|
  Rat   543 RCASHCPLERKLCPSVHLPWVQRDRDPHSQGPGHVPLNLQLSDTDDNETLHELHIESSDERSPSD 607

  Fly   427 YAVIDECRRRVSDIEI--------------EDVPMIVSSTP-----------MKPLDEQQCIAQI 466
            .::..:..|.:.::.:              |:.|..:.::|           :|....::|:..|
  Rat   608 LSLTGDTDRSMENLGVKFGKSECVSHDKGKEECPTHLETSPKAFSFIKQQRVVKRTSSEECVTVI 672

  Fly   467 IKSELRRPPHVLVKSKSVLEDQEPSCILRHNQRRELESTVVCSDSISCAMMNK-LAKEVVPPAPG 530
            ..:|...|.........|:                    .|..|.||.:.... .::|:...:|.
  Rat   673 FDAENGEPVEFSSHQAGVV--------------------TVTRDEISISSTPAGPSEELTELSPQ 717

  Fly   531 MVTKL------KERMLLRQASTPPTASSWRRSNGWKRVTSP---VHPPVAV---SPKKKAAKSTE 583
            .:|..      ::...|.:....|..:..:..||  .:|:|   .:.|..|   ||:.|..|.|:
  Rat   718 GITHFQPGATARDYPFLGRPEEEPKTNIPKDENG--ILTAPNDSFNSPTTVTQNSPRPKLVKPTQ 780

  Fly   584 --------------------------------PPKSCLPKAQPTRI---------------PTSI 601
                                            |.||.|....||.:               ||..
  Rat   781 GVAWQSNSRSVANMSVYTKQGLTKIPSRSKISPQKSKLVDPMPTTLVPSSGLGTLAKTPASPTGK 845

  Fly   602 HSSVSSSSSMSSSCSPSPSSPSPQSPQQ--------------RSPGQQTQQQQQQQQQRKS---- 648
            .|..:::.|..:.|...|.|..|:.|.|              :.|..||...|.:....||    
  Rat   846 LSQCTNAESPGTFCDVQPESHIPKHPTQLPHIPKISNKKNWVQCPKSQTAGIQSRHLMGKSDNGE 910

  Fly   649 ----------------KIP-PPVPVRRS 659
                            :.| ||.|..||
  Rat   911 SPTRAKRCGSEPKTRMRSPSPPTPPGRS 938

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42663NP_001188915.1 DUF3585 <111..>209 CDD:304905 36/116 (31%)
Nckap5XP_038947097.1 Smc <33..>252 CDD:224117 60/207 (29%)
Herpes_BLLF1 <701..1087 CDD:282904 44/240 (18%)
NCKAP5 1467..1767 CDD:405843
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352245
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto95959
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.930

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