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Protein Alignment wuc and Lin52
DIOPT Version :9
Sequence 1: | NP_001097291.1 |
Gene: | wuc / 36401 |
FlyBaseID: | FBgn0033770 |
Length: | 136 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006240418.1 |
Gene: | Lin52 / 362763 |
RGDID: | 1306798 |
Length: | 157 |
Species: | Rattus norvegicus |
Alignment Length: | 112 |
Identity: | 25/112 - (22%) |
Similarity: | 45/112 - (40%) |
Gaps: | 24/112 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 SPSDEEYTLEEDPIEFELEKMERGSSN-------GESEEESQRDQKQADSIIDDMVEQNDQEQEA 70
||:|.. .||...:.| ||::|.|.: |.:|..:........|....|.|
Rat 7 SPTDGT-DLEASLLSF--EKLDRASPDLWPEQLPGVAEFAASFKSPITSSPPTWMAE-------- 60
Fly 71 AGEQDVERENDLRKMYELSLLPPAAIAAQIQQMEKEIYELSQWEARE 117
:||: |:..:.||..|..|.:..:::.::...|:|...|.::
Rat 61 -----IERD-DIDMLKELGSLTTANLMEKVRGLQNLAYQLGLDECKD 101
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
wuc | NP_001097291.1 |
LIN52 |
<57..127 |
CDD:287062 |
12/61 (20%) |
Lin52 | XP_006240418.1 |
LIN52 |
18..100 |
CDD:401871 |
20/97 (21%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR31489 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
2 | 2.060 |
|
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