Sequence 1: | NP_001246283.1 | Gene: | Nup188 / 36397 | FlyBaseID: | FBgn0033766 | Length: | 1866 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_938046.2 | Gene: | Nup188 / 227699 | MGIID: | 2446190 | Length: | 1759 | Species: | Mus musculus |
Alignment Length: | 1847 | Identity: | 426/1847 - (23%) |
---|---|---|---|
Similarity: | 737/1847 - (39%) | Gaps: | 303/1847 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 PAVEKSVITDWKRLWPMVSGIHYETPQDTVREELMNVASELQAGVLQFKPKNASSLELGTLLKEK 66
Fly 67 KQEKLLPFTE---RLQDLLDLESAQCWEILCYYLTQEYRGSASLLTQLISTETNMAKLHEDIRHY 128
Fly 129 YSLERMVVLKIVKNLIVFHQVPNHPYHREYRAVVEKITIPRLRDSYLDQLESLICEVPPRKLMAG 193
Fly 194 ECFHSAERLVA-WSERNAREINEVLHILLVLAEHLPMGLEQIKRIFAACKQHSFGKMQS--YL-- 253
Fly 254 DDSQPYHQEIIRSLSYSELMLVLKCLDFE---------KPEKHSDLIEKLI-EDLQVDIASMYHR 308
Fly 309 PEHGPLLLAWMLLRLRGTNDADDASSLLRCRQLGKRAVDLKCFVQLHLIARHSMYADDSMLSRIV 373
Fly 374 RRTIYNQVGYLCDLFDGDGSCARYEGIYELLCELVSWPHLAKDFCSRED--------DGPCSLYK 430
Fly 431 TLLENFPLELTHLSKLALSLTKAGQGNYVKSQLEALPILALRYDE-SQHKLREVDTNEFELLASV 494
Fly 495 QPFQ-------QIDFTIPAGTSCTAIQHPSGCFMHFRFPVNYFDALHHEINCLLRETGHLHGDFE 552
Fly 553 SSERIRNVEAGLRFLESAVKLSQSISGISAEMVHP-TEMCVDLLHTFKSVQYPPVGLLSSCLNVC 616
Fly 617 TALLPLVDEEIFSRISNLHILPTVSPGSHYDFKMYANANGVGFESRFLGSVIDNVEKKRERYEFL 681
Fly 682 LSYIGFLRAYSNLKRNR----QIQMEIPGLIFLLKDVFPHLHTWHFSSQVERNKIYFEILSFICD 742
Fly 743 ILDLFNTAKESNCKQREL-------LVKVCVYSLLNLENGLILLRFVGVGNAYVQYTMELETNWM 800
Fly 801 QQQPHG------LMMLVRLSMRILMQLLRLKEEVYGNSETLSPLEALIYTQPKQRDTLRIIPTVC 859
Fly 860 SYMSNIFDRWLPILSCRLLKRIALQFNMSLLACLDMEADQIRLTFMQKLPDELESDSIKIAILEL 924
Fly 925 VDACIAKQPGVTEAFFKVNYALDKRSRSFFSKDCVPNIGE-SIVTYMRDFLDALQVDPLTIQQAL 988
Fly 989 PAKIMTIFHSMW--KHNLQMLVDDLVKDKQFWKKLCSPLFSELQPN--------LRIYTQLLNII 1043
Fly 1044 SIEVY--TGNGNNAALLDVMNKFFEQKNFGPWLNYVFNMPKVPAVKNLSSSDHLPDWICCLQAFK 1106
Fly 1107 DLIVI------------LLKKQPKFVTIPESQFKLMAQKCLVVLVDRSNYLEDMRPFIILAELYV 1159
Fly 1160 FILLEFKHAYTDSLEEEQTLMDLLLQLMNRICACYEDQHVRAKEACLAIVTKCTHL-YTDLLIRD 1223
Fly 1224 ----SSIALRFLNSVVGIICSELQHMENSVSL--EKSQGLNNSDSSDSKTSTNS----------- 1271
Fly 1272 ----LILCLNLLKAVATIFHNDGPGNW-----DLPF---------VSVRLFQRLVRCVSRTLPLF 1318
Fly 1319 SKQVLSVQLLDVLIVFAKGHCSVEFLHCDVGEYLWLKLLPPRELLQSKHEFTKTTAADAEGWTVE 1383
Fly 1384 QWWPVYARGIELVTIIYEKHKKCFLEDAFQFVGIHAVFLEDALLLSKQSLEPSAMYLIKAAVNLV 1448
Fly 1449 ASLTEHHKEWKQDSDLSLANLMRAVQ---SLLCHT-SSLFHQQKNLKCLLAGR-----------R 1498
Fly 1499 SQ-----LEILRSTEAL-----------IVDDE------LISACNDLTDIIISCVKALLRFSPDL 1541
Fly 1542 MELLCCSAYEPSKHSILLDVKFGAPKLNEENLTLTFGIVLNLVNIYVKALNMQNHGFSEVPLNSL 1606
Fly 1607 PNVEHSGDNDDPEVCVGNQTNRTFSKPLSNVSISTGTCPASELLSNMDGQLCLLALEHLLMLVAS 1671
Fly 1672 QAICIIRSPNLETLWKQIVRRDISNEL 1698 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup188 | NP_001246283.1 | Nup188 | 31..943 | CDD:421740 | 237/963 (25%) |
Nup188 | NP_938046.2 | Nup188 | 31..941 | CDD:287461 | 234/961 (24%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1255..1277 | 4/23 (17%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1508..1552 | 13/60 (22%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1718..1743 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167834490 | |
Domainoid | 1 | 1.000 | 205 | 1.000 | Domainoid score | I2932 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4833 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 273 | 1.000 | Inparanoid score | I2973 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG52707 | |
OrthoDB | 1 | 1.010 | - | - | D201834at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0006520 | |
OrthoInspector | 1 | 1.000 | - | - | oto93597 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106099 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR31431 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4870 |
SonicParanoid | 1 | 1.000 | - | - | X5492 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.840 |