Sequence 1: | NP_001246283.1 | Gene: | Nup188 / 36397 | FlyBaseID: | FBgn0033766 | Length: | 1866 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001107292.1 | Gene: | nup188 / 100135081 | XenbaseID: | XB-GENE-5933085 | Length: | 1739 | Species: | Xenopus tropicalis |
Alignment Length: | 1825 | Identity: | 429/1825 - (23%) |
---|---|---|---|
Similarity: | 757/1825 - (41%) | Gaps: | 295/1825 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 KRLWPMVSGIHYETPQDTVREELMNVASELQAGVLQFKPKNASSLELGTLLKEKKQEKLLPFTE- 76
Fly 77 ---RLQDLLDLESAQCWEILCYYLTQEYRGSASLLTQLISTETNMAKLHEDIRHYYSLERMVVLK 138
Fly 139 IVKNLIVFHQVPNHPYHREYRAVVEKITIPRLRDSYLDQLESLICEVPPRKLMAGECFHSAERLV 203
Fly 204 AWSERNARE---INEVLHILLVLAEHLPMGLEQIKRIFAACKQHSFG-KMQS-YLDDSQPYHQEI 263
Fly 264 IRSLSYSELMLVLKCLDFE---------KPEKH---SDLIEKLIEDLQVDIASMYHRPEHGPLLL 316
Fly 317 AWMLLRLRGTNDADDASSLLRCRQLGKRAVDLKCFVQLHLIARHSMYADDSMLSRIVRRTIYNQV 381
Fly 382 GYLCDLFDGDGSCARYEGIYELLCELVSWPHLAKDFCSREDDGPCSLYKTLLEN----FPLELTH 442
Fly 443 LSKLALSLTKAGQGNYVKSQLEALPILALRYDESQHKLREVDTNEFELLASVQP--------FQQ 499
Fly 500 IDFTIPAGTSCTAIQHPSGCFMHFRFPVNYFDALHHEINCLLRETGHLHGDFESSERIRNVEAGL 564
Fly 565 RFLESAVKLSQSISGISAEMVHP-TEMCVDLLHTFKSVQYPPVGLLSSCLNVCTALLPLVDEEIF 628
Fly 629 SRISNLHILP-TVSPGS-HYDFKMYANANGVGFESRFLGSVIDNVEKKRERYEFLLSYIGFLRAY 691
Fly 692 SNLKRNR----QIQMEIPGLIFLLKDVFPHLHTWHFSSQVERNKIYFEILSFICDILDLFNTAKE 752
Fly 753 SNCKQRELLVKVCVYSLLNLENGLILLRFVGVGNAYVQYTM--ELETNWMQQQPHGLMMLVRLSM 815
Fly 816 RILMQLLRLKEEVYGNSETLSPLEALIYTQPKQRDTLRIIPTVCSYMSNIFDRWLPILSCRLLKR 880
Fly 881 IALQFNMSLLACLDMEADQIRLTFMQKLPDELESDSIKIAILELVDACIAKQPGVTEAFFKVNYA 945
Fly 946 LDKRSRSFFSKDCVPNIGE-SIVTYMRDFLDALQVD-----PLTIQQALPAKIMTIFHSMWKHNL 1004
Fly 1005 QMLVDDLVKDKQFWKKLCSPLFSELQ-PN-------LRIYTQLLNIISIEVYTG-NGN-NAALLD 1059
Fly 1060 VMNKFFEQKNFGPWLNYVFNMPKVPAVKNLSSSDHLPDWICCLQAFK-DLIVILLKKQPKFVTIP 1123
Fly 1124 ESQFKL----MAQKCLVVLVDRSN---YLEDMRPFIILAELYVFILLEFKHAYTDSLEEEQTLMD 1181
Fly 1182 LLLQLMNRICACYEDQHV--RAKEACLAIVTKCTHL----------YTDLLIRDSSIALRFLNSV 1234
Fly 1235 VGIICSELQHMENSVSL--EKSQGLNNSDSSDSKTSTNS---------------LILCLNLLKAV 1282
Fly 1283 ATIFHNDGPGN-WD--------LPF------VSVRLFQRLVRCVSRTLPLFSKQVLSVQLLDVLI 1332
Fly 1333 VFAKGH-CSVEFLHCDVGEYLWLKLLPPRELLQSKHEFTKTTAADAEGWTVEQWWPVYARGIELV 1396
Fly 1397 TIIYEKHKKCFLEDAFQFVGIHAVFLEDALL--LSKQSLEPSAMYLIKA--AVNLVASLTEHHKE 1457
Fly 1458 WKQDSDLSLANLMRAVQSLLCH----TSSLFHQQKNLKCLLAGRRSQLEILRST----------- 1507
Fly 1508 ---------EALIVDDELISACNDLTDIIISCVKALLRFSPDLMELLCCSAYEPSKHSILLDVKF 1563
Fly 1564 GAPKLNEENLTLTFGIVLNLVNIYVKALNMQNHGFSEVPLNSLPNVEHSGDNDDPEVCVGNQTNR 1628
Fly 1629 TFSKPLSNVSISTGTCPASELLSNMDGQLCLLALEHLLMLVASQAICIIRSPNLETLWKQIVRRD 1693
Fly 1694 ISNEL 1698 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nup188 | NP_001246283.1 | Nup188 | 31..943 | CDD:421740 | 242/953 (25%) |
nup188 | NP_001107292.1 | Nup188 | 30..935 | CDD:371085 | 243/959 (25%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1247..1267 | 4/19 (21%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1504..1528 | 2/23 (9%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1696..1717 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 236 | 1.000 | Domainoid score | I2293 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 309 | 1.000 | Inparanoid score | I2565 |
OMA | 1 | 1.010 | - | - | QHG52707 | |
OrthoDB | 1 | 1.010 | - | - | D201834at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0006520 | |
OrthoInspector | 1 | 1.000 | - | - | otm48553 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR31431 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4870 |
SonicParanoid | 1 | 1.000 | - | - | X5492 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 11.110 |