DRSC/TRiP Functional Genomics Resources

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Protein Alignment nemy and Cybrd1

DIOPT Version :9

Sequence 1:NP_725208.1 Gene:nemy / 36395 FlyBaseID:FBgn0261673 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_082869.2 Gene:Cybrd1 / 73649 MGIID:2654575 Length:290 Species:Mus musculus


Alignment Length:218 Identity:72/218 - (33%)
Similarity:116/218 - (53%) Gaps:13/218 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 ILSTILLVGVL--VLTLFWVMFYRDGFAWSESPKQQFNLHPILMIAGFVTLSGFSILIYRL---C 122
            :|.:.||||.|  :..|.||:.:|:|..|:.| ..:||.||:|.:.|||.:.|.:|::|||   .
Mouse    12 LLVSALLVGFLSVIFVLIWVLHFREGLGWNGS-GLEFNWHPVLAVTGFVFIQGIAIIVYRLPWTW 75

  Fly   123 RCVKQIYVKLIHMFFHAVAIPCIALGFISVFASHDALHKVNFYSLHSWLGFVTMGMFVLQFVIGF 187
            :|.| :.:|.||...:|||.....:..::||..|:.....:.||||||:|...:.:::.|.|:||
Mouse    76 KCSK-LLMKSIHAGLNAVAAILAIISVVAVFEYHNVQKVPHMYSLHSWVGLTALILYIQQLVVGF 139

  Fly   188 FSFLVMLCCENKTYSCRSAMVPIHASLGLANFWLAIATSVTGLIEKERETVNEAGVSSENKLVEH 252
            |.||:...    ..|.|:.::|||...||..|...|||.:.|:.||....:......|...  |.
Mouse   140 FVFLLPWA----PPSLRAIVMPIHVYSGLLLFGTVIATVLMGVTEKLFFVLKHPSYHSFPP--EG 198

  Fly   253 YITSAIGVTLIFIGIIVTFAVRR 275
            ..|:.:|:.::..|.::.:.|.|
Mouse   199 VFTNTLGLLILVFGALIFWIVTR 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nemyNP_725208.1 Cytochrom_B561 99..233 CDD:281217 48/136 (35%)
Cybrd1NP_082869.2 Cytochrome_b_N 36..187 CDD:304880 55/156 (35%)
Heme b 1 binding. /evidence=ECO:0000250|UniProtKB:Q53TN4 115..118 0/2 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..290
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1619
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10106
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X568
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.870

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