DRSC/TRiP Functional Genomics Resources

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Protein Alignment nemy and cyb561

DIOPT Version :9

Sequence 1:NP_725208.1 Gene:nemy / 36395 FlyBaseID:FBgn0261673 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_001122216.2 Gene:cyb561 / 568765 ZFINID:ZDB-GENE-070713-3 Length:253 Species:Danio rerio


Alignment Length:218 Identity:63/218 - (28%)
Similarity:117/218 - (53%) Gaps:16/218 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 IVILSTILLVGVLVLTLFWVMFYRDGFAWSESPKQQFNLHPILMIAGFVTLSGFSILIYRLCRCV 125
            :|.|:.:::.||      |:..||.|:||..| .|:||:||:.|:.|.|.|.|.::|:||:.|..
Zfish    23 VVGLACVVITGV------WMGHYRGGYAWDGS-AQEFNVHPLCMVLGLVFLYGDAVLVYRVFRNE 80

  Fly   126 KQIYVKLIHMFFHAVAIPCIALGFISVFASHDALHKVNFYSLHSWLGFVTMGMFVLQFVIGFFSF 190
            .:..||::|...|.:|:....:|.::||..|.:....:.||||||.|.:|..:|.||:::|...|
Zfish    81 SKRSVKILHALLHMMALVISIVGLVAVFDFHSSSKISHMYSLHSWCGMLTFVLFFLQWLLGLGFF 145

  Fly   191 LVMLCCENKTYSCRSAMVPIHASLGLANFWLAIATSVTGLIEKERETVNEAGVSSENKLV-EHYI 254
            |....    :...:|..:|:|...||....:::.:.:.|:.||....:    :|:.:... |..:
Zfish   146 LFPWA----SAQLKSWYLPLHVFFGLLLLVMSVGSCLLGITEKLLFNI----MSTYSTFAPEGIL 202

  Fly   255 TSAIGVTLIFIGIIVTFAVRRSN 277
            .:.:|:.|:..|::|.:.|.:.:
Zfish   203 ANVLGLLLVCFGVLVGYVVTKED 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nemyNP_725208.1 Cytochrom_B561 99..233 CDD:281217 40/133 (30%)
cyb561NP_001122216.2 Cytochrome_b_N 29..237 CDD:304880 61/212 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1619
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1503869at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10106
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X568
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.880

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