DRSC/TRiP Functional Genomics Resources

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Protein Alignment nemy and cybrd1

DIOPT Version :9

Sequence 1:NP_725208.1 Gene:nemy / 36395 FlyBaseID:FBgn0261673 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_001165750.1 Gene:cybrd1 / 548408 XenbaseID:XB-GENE-1011687 Length:283 Species:Xenopus tropicalis


Alignment Length:215 Identity:70/215 - (32%)
Similarity:118/215 - (54%) Gaps:14/215 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 IVILSTILLVGVL--VLTLFWVMFYRDGFAWSESPKQQFNLHPILMIAGFVTLSGFSILIYRL-- 121
            :|.|.:.||:|.|  :.||.||:.:|:|..| :....:||.||:|:.:||:.:.|.:|::|||  
 Frog     8 LVFLVSSLLLGFLGVIFTLVWVLHWREGLGW-DGGAAEFNWHPVLVTSGFIFIQGIAIIVYRLPW 71

  Fly   122 -CRCVKQIYVKLIHMFFHAVAIPCIALGFISVFASHDALHKVNFYSLHSWLGFVTMGMFVLQFVI 185
             ..|.| :.:|.||...|..|:....:..::||..|:|.:..|.||||||:|...:.::.||.|:
 Frog    72 TWNCSK-LLMKFIHAGLHLTALVFTIVALVAVFDFHNAKNIPNMYSLHSWIGLTVVILYALQLVL 135

  Fly   186 GFFSFLVMLCCENKTYSCRSAMVPIHASLGLANFWLAIATSVTGLIEKERETVNEAGVSSENKLV 250
            |...:|:....:    :.|:|::|:|...||..|...|||::.|:.||...::.|...|....  
 Frog   136 GVSIYLLPFARD----TLRAALMPVHVYSGLLIFGTVIATALMGITEKLIFSLKEPPYSKMPP-- 194

  Fly   251 EHYITSAIG-VTLIFIGIIV 269
            |....:..| :.|:|.|::|
 Frog   195 EAIFVNTFGLIILVFGGLVV 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nemyNP_725208.1 Cytochrom_B561 99..233 CDD:281217 45/136 (33%)
cybrd1NP_001165750.1 Cyt_b561_CYBRD1 34..186 CDD:176495 51/157 (32%)
Heme b 1 binding. /evidence=ECO:0000250|UniProtKB:Q53TN4 113..116 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..263
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1503869at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10106
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X568
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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