DRSC/TRiP Functional Genomics Resources

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Protein Alignment nemy and cyb561

DIOPT Version :10

Sequence 1:NP_725208.1 Gene:nemy / 36395 FlyBaseID:FBgn0261673 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_001005633.1 Gene:cyb561 / 448092 XenbaseID:XB-GENE-955821 Length:246 Species:Xenopus tropicalis


Alignment Length:215 Identity:76/215 - (35%)
Similarity:116/215 - (53%) Gaps:13/215 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 IVILSTILLVGVLVLTLFWVMFYRDGFAWSESPKQQFNLHPILMIAGFVTLSGFSILIYRLCRCV 125
            :|..|.||.:.||.:|..|:..||.||:|| .| .|||:||:.|:.|.|.|.|.::|:||:.|..
 Frog    15 LVAGSQILGIAVLAITGAWLSQYRGGFSWS-GP-LQFNVHPLCMVLGMVFLCGEALLVYRVFRHE 77

  Fly   126 KQIYVKLIHMFFHAVAIPCIALGFISVFASHDALHKVNFYSLHSWLGFVTMGMFVLQFVIGFFSF 190
            .:...|::|...|.:|:....:|.|:||..|.|....:.||||||.|..|..:::||::|||..|
 Frog    78 TKRATKILHGVLHVMALVISLVGIIAVFQFHKANGYADMYSLHSWCGITTFSLYILQWIIGFLLF 142

  Fly   191 LVMLCCENKTYSCRSAMVPIHASLGLANFWLAIATSVTGLIEKERETVNEAGVSSENKLVEHYIT 255
            .|    ....|:.||...|:|...|.|.|..:||||:.||.||.....::       :..|..:.
 Frog   143 FV----PGVAYTYRSRFKPLHEFFGRALFLSSIATSLLGLTEKMFSDYSQ-------RPAEGVLV 196

  Fly   256 SAIGVTLIFIGIIVTFAVRR 275
            :.:||.|:..|.::.:.:.|
 Frog   197 NTLGVLLVVFGAVIAYILTR 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nemyNP_725208.1 Cytochrome_b_N 79..277 CDD:474033 69/197 (35%)
cyb561NP_001005633.1 Cytochrome_b_N 27..230 CDD:474033 71/203 (35%)

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