DRSC/TRiP Functional Genomics Resources

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Protein Alignment nemy and Cyb561a3

DIOPT Version :10

Sequence 1:NP_725208.1 Gene:nemy / 36395 FlyBaseID:FBgn0261673 Length:290 Species:Drosophila melanogaster
Sequence 2:XP_038940141.1 Gene:Cyb561a3 / 361729 RGDID:1304670 Length:286 Species:Rattus norvegicus


Alignment Length:226 Identity:65/226 - (28%)
Similarity:115/226 - (50%) Gaps:16/226 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 YLLIVILSTILLVGVLVLTLFWVMFYRDGFAWSESPKQQFNLHPILMIAGFVTLSGFSILIYRLC 122
            |:..::|.::..:.:| .|.:|:.::|.|||| :.....||.||:||::|.|.|.|.:.|:||| 
  Rat    36 YMSCMVLGSLGSMCIL-FTTYWMQYWRGGFAW-DGTVLMFNWHPVLMVSGMVVLYGAASLVYRL- 97

  Fly   123 RCVKQIYV------KLIHMFFHAVAIPCIALGFISVFASHDALHKVNFYSLHSWLGFVTMGMFVL 181
               ...:|      |::|...|.:|.....:|..:||..|:.....:.||||||||..|:.:|..
  Rat    98 ---PASWVGPKLPWKVLHAALHLLAFTVTVVGLTAVFGFHNHSKITHLYSLHSWLGITTVALFAC 159

  Fly   182 QFVIGFFSFLVMLCCENKTYSCRSAMVPIHASLGLANFWLAIATSVTGLIEKERETVNEAGVSSE 246
            |:.:||..||:....:    ..||.:.|:|...|.....|:||:.::|:.||....:..|.....
  Rat   160 QWFLGFAVFLLPWASQ----WLRSLLKPVHVFFGACILSLSIASVISGINEKLFFVLKNATRPYS 220

  Fly   247 NKLVEHYITSAIGVTLIFIGIIVTFAVRRSN 277
            :...|....::.|:.::..|::|.:.:..|:
  Rat   221 SLPGEAVFANSTGILVVSFGLLVLYILLASS 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nemyNP_725208.1 Cytochrome_b_N 79..277 CDD:474033 60/203 (30%)
Cyb561a3XP_038940141.1 Cytochrome_b_N 39..217 CDD:474033 59/187 (32%)

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