DRSC/TRiP Functional Genomics Resources

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Protein Alignment nemy and F39G3.4

DIOPT Version :10

Sequence 1:NP_725208.1 Gene:nemy / 36395 FlyBaseID:FBgn0261673 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_504270.2 Gene:F39G3.4 / 185502 WormBaseID:WBGene00018209 Length:244 Species:Caenorhabditis elegans


Alignment Length:230 Identity:60/230 - (26%)
Similarity:99/230 - (43%) Gaps:45/230 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LVGVLVLTL---FWVMFYRDGFAWSESPK------------QQFNLHPILMIAGFVTLSGFSILI 118
            |||.:.:.|   |:..|| :|..|....|            :...||..||..||:.|.|.::|.
 Worm    16 LVGFITVCLNGYFFNTFY-NGIGWPFELKVGSTDARGLVEMRGKQLHGFLMFLGFIYLQGEALLS 79

  Fly   119 YRLCRCVKQIYVKLIHMFFHAVAIPCIALGFISVF-------ASHDALHKVNFYSLHSWLGFVTM 176
            ||:.|........|||.|.|..:|........|:.       |||       |.::||:||...:
 Worm    80 YRVYRFTTNRVSILIHTFLHIASIVLAVGALFSIILTIKYTGASH-------FSNIHSYLGVCLL 137

  Fly   177 GMFVLQFVIGFFSFLVMLCCENKTYSCRSAMVPIHASLGLANFWLAIATSVTG---LIEKERETV 238
            .::..|...||.::|..  |..|.|  :|.::|:|.::|::...:|......|   ::..:....
 Worm   138 LVYSGQLSFGFCTYLFK--CTPKDY--QSRLMPVHRAVGISCMVVACVQCCLGYNQMVSGKLSCF 198

  Fly   239 NEAGVSSENKLVEHYITSAIGVTLIFIGIIVTFAV 273
            .:  :|..|::  .|:.|   :::|| .||.|..|
 Worm   199 KD--LSCANRI--EYVGS---LSMIF-NIIYTIMV 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nemyNP_725208.1 Cytochrome_b_N 79..277 CDD:474033 55/217 (25%)
F39G3.4NP_504270.2 Cytochrom_B561 60..189 CDD:427188 40/139 (29%)

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