DRSC/TRiP Functional Genomics Resources

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Protein Alignment nemy and LOC1276203

DIOPT Version :10

Sequence 1:NP_725208.1 Gene:nemy / 36395 FlyBaseID:FBgn0261673 Length:290 Species:Drosophila melanogaster
Sequence 2:XP_315519.4 Gene:LOC1276203 / 1276203 VectorBaseID:AGAMI1_001599 Length:250 Species:Anopheles gambiae


Alignment Length:244 Identity:75/244 - (30%)
Similarity:124/244 - (50%) Gaps:28/244 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PPPPDEKRYEEDPDNAWNCCSWCEYLLIVILSTILLVGVLVLTLFWVMFYRDGFAWSESPKQQFN 98
            ||||          :|.|     .:.::.:::.::.:.:::|...|:..:.:|..||..|..|||
Mosquito     5 PPPP----------SALN-----NFRILYLVTQLVGITIIILVSCWIGIHLNGLGWSARPSVQFN 54

  Fly    99 LHPILMIAGFVTLSGFSILIYRLCRCVKQIYVKLIHMFFHAVAIPCIALGFISVFASHDALHK-- 161
            .||:||..|.:.|.|.||||||..|..::..:|:.|...|..|.....:..::||.||: |.|  
Mosquito    55 WHPLLMSVGMIFLYGNSILIYRGFRYARKKPLKITHATIHGAAFIFTVVALVAVFDSHN-LAKPN 118

  Fly   162 --VNFYSLHSWLGFVTMGMFVLQFVIGFFSFLVMLCCENKTYSCRSAMVPIHASLGLANFWLAIA 224
              .|.|:||||:|...:.:|.||:|.||.::|.....|    ..|::.:|:|...|:|.|.:|||
Mosquito   119 PIPNMYTLHSWVGLSAVILFSLQYVFGFAAYLFPGVRE----QLRASYMPVHVFFGVAGFVMAIA 179

  Fly   225 TSVTGLIEKERETVNEAGVSSENKLVEHYITSAIGVTLIFIGIIVTFAV 273
            .::.||:||...:|.:........:    :.:.||:..|..|.:|.|.|
Mosquito   180 AALLGLLEKAIFSVKDYSALPPQAV----LINTIGMLYIVYGGLVVFLV 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nemyNP_725208.1 Cytochrome_b_N 79..277 CDD:474033 68/199 (34%)
LOC1276203XP_315519.4 Cytochrome_b_N 29..244 CDD:474033 69/205 (34%)

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