DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8646 and sgsh

DIOPT Version :10

Sequence 1:NP_610807.3 Gene:CG8646 / 36394 FlyBaseID:FBgn0033763 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001116740.1 Gene:sgsh / 563849 ZFINID:ZDB-GENE-030131-4958 Length:511 Species:Danio rerio


Alignment Length:567 Identity:133/567 - (23%)
Similarity:224/567 - (39%) Gaps:161/567 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FLW-LICLLLPIIDAAEVEKSPAKPNIIFILADDLGFNDVGFHGSAEIPTPNIDALAYSGIIL-N 65
            |.| |:|||| ..|.......    |::.|:|||.|| :...:.:..:.||::.||:...:|. |
Zfish     5 FAWTLLCLLL-CFDVGGCRSR----NVLLIIADDGGF-ETDVYNNTVVQTPHLRALSKRSLIFKN 63

  Fly    66 RYYVAPICTPSRSALMT-------GKYPIHTGMQHTVLYAAEPRGLPLEEKILPQYLNELGYTSH 123
            .:.....|:||||.::|       |.|.:|.|:.|...:..        .:.||..|......:.
Zfish    64 AFTSVSSCSPSRSTILTGLPQHQNGMYGLHQGVHHFNSFDG--------VQSLPLLLKRANIHTG 120

  Fly   124 IAGKWHLGHWKLKYTPLYR-GFSSHVGFWSGHQDYNDHTAVENN--QWGLDMRNGTQVAYDLHGH 185
            |.||.|:|.     .|:|. .|:           |.:.|   |:  |.|   ||.|::...:...
Zfish   121 IIGKKHVGP-----GPVYPFDFA-----------YTEET---NSVLQVG---RNITKIKLLVRKF 163

  Fly   186 YTTDVITDHSVKVIANHNATKGPLFLYVA----HAACHSSNPYNPL------------PVPD--- 231
            :       .|.|...:....:.|.|||||    |...||...|...            .:||   
Zfish   164 F-------QSHKEERSETKEERPFFLYVAFHDPHRCGHSQPQYGVFCEKFGNGESGMGRIPDWEP 221

  Fly   232 ----NDVIKMSH-IPN--YKRRKFAAM---VSKMDNSVGQIVDQLRKSNMLENSIIIFSSDNGGP 286
                .|.:|:.: ||:  ..|...||.   ||::|..:|.::::|||:....::::|:|||||  
Zfish   222 KYYSPDQVKVPYFIPDTPAARADIAAQYTTVSRLDQGIGLVLEELRKAGFENDTLVIYSSDNG-- 284

  Fly   287 AQGFNLNFASNYPLKGVKNTLWEGGVRAAGLMWSPLLKKSQR---VSNQTMHIIDWLPTLLE--- 345
                       .|....:..|:..||:...|:.||  :..||   :|...:.::|..||:|:   
Zfish   285 -----------IPFPNGRTNLYGSGVKEPMLLSSP--EHQQRWGKLSQAYVSLLDITPTILDWFS 336

  Fly   346 -------AAGGQPALSNLSKQIDGQSIWRALVQDKASPRL---NVLHNIDDIWGSAALSVGDWKL 400
                   .:..||.      ::.|:|:..||:.:.:...:   ..||.:...:...::..|.::|
Zfish   337 LPYPSYSLSMSQPV------ELTGRSLLPALISEPSWDTVFSSQSLHEVTMFYPMRSIHKGPYRL 395

  Fly   401 VKGTNYRGSW----DGWYGPAGERDPRLYDWQLVGRSRAGKALEALKMLPSRADQQRIRAAATVS 461
            :...:||..:    |.:..|..:        .|:.|:::|:.....|.|.....:||..      
Zfish   396 LHNLHYRMPFPIDQDFYISPTFQ--------DLLNRTQSGRPTGWFKTLNEYYYRQRWE------ 446

  Fly   462 CPGQSSQGTSCVATAFSAPCLFHIRDDPCEQYNLA--KQYPEVVNAL 506
                                ||.:|.||.|:.|||  ..|.||:.:|
Zfish   447 --------------------LFDVRTDPMEKVNLAGDLDYSEVLESL 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8646NP_610807.3 4-S 26..405 CDD:293753 101/434 (23%)
DUF4976 <480..510 CDD:419068 13/29 (45%)
sgshNP_001116740.1 SGSH 25..481 CDD:293751 125/542 (23%)

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