DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8646 and Sgsh

DIOPT Version :9

Sequence 1:NP_610807.3 Gene:CG8646 / 36394 FlyBaseID:FBgn0033763 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster


Alignment Length:592 Identity:126/592 - (21%)
Similarity:221/592 - (37%) Gaps:213/592 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WF--LWLI--CLLLPIIDAAEVEKSPAKPNIIFILADDLGFNDVGFHGSAEIPTPNIDALAYSGI 62
            |.  ||||  |             |....|::.:||||.|| :.|.:.:....|||:||||..|:
  Fly     6 WIFTLWLIAGC-------------SAGPQNVLLLLADDAGF-ESGAYLNKFCQTPNLDALAKRGL 56

  Fly    63 ILNRYYVA-PICTPSRSALMTGK-------YPIHTGMQHTVLYAAEPRGLPLEEKILPQYLNELG 119
            :.|..:.: ..|:||||.|:||:       |.:|.|:.:..:       || :...||..:.:..
  Fly    57 LFNNAFTSVSSCSPSRSQLLTGQAGHSSGMYGLHQGVHNFNV-------LP-DTGSLPNLIRDQS 113

  Fly   120 ---YTSHIAGKWHLG---HWKLKYTPLYRGFSSHVGFWSGHQDYNDHTAVENNQWGLDMRNGTQV 178
               ..|.|.||.|:|   :::..:                .|....|:.   ||.|   ||.|: 
  Fly   114 GGRILSGIIGKKHVGAANNFRFDF----------------EQTEEQHSI---NQIG---RNITR- 155

  Fly   179 AYDLHGHYTTDVITDHSVKVIANHNATKGPLFLYVA----HAACHSSNPYN-------------- 225
                        :.:::.:.:......|.|.||.|.    |...|.:..:.              
  Fly   156 ------------MKEYARQFLKQAKDEKKPFFLMVGFHDPHRCGHITPQFGEFCERWGSGEEGMG 208

  Fly   226 -----------------PLPVPDNDVIKMSHIPNYKRRKFAAM---VSKMDNSVGQIVDQLRKSN 270
                             |..:||.||:         |::.||.   :|::|..||.::.:|..:.
  Fly   209 SIPDWKPIYYDWRNLDVPAWLPDTDVV---------RQELAAQYMTISRLDQGVGLMLKELEAAG 264

  Fly   271 MLENSIIIFSSDNGGPAQGFNLNFASNYPLKGVKNTLWEGGVRAAGLMWSPLLKKSQRVSNQT-- 333
            :.:.:::|::||||.|           :|  |.:..|:|.|:|:..::.||  .|..|....|  
  Fly   265 VADQTLVIYTSDNGPP-----------FP--GGRTNLYEHGIRSPLIISSP--NKEDRHHEATAA 314

  Fly   334 -MHIIDWLPTLLEAAGGQPALSNLSKQIDGQSIWRALVQDKASPRLNVLHNIDDIWGSAA----- 392
             :.::|..|::::|.  |....|.:| |.|:||...|.::..      :...|.::||.:     
  Fly   315 MVSLLDIYPSVMDAL--QIPRPNDTK-IVGRSILPVLREEPP------IKESDSVFGSHSYHEVT 370

  Fly   393 -------LSVGDWKLVKGTNYRGSW-------DGWYGPAGERDPRLYDWQLVGRSRAGKAL---E 440
                   :....:||:...||   |       |.:..|..:        |::..:...:.|   .
  Fly   371 MAYPMRMVRNRRYKLIHNINY---WADFPIDQDFYTSPTFQ--------QILNATLRKQTLPWYR 424

  Fly   441 ALKMLPSRADQQRIRAAATVSCPGQSSQGTSCVATAFSAPCLFHIRDDPCEQYNLA--KQYPEVV 503
            :|.....|.:.:                             |:.|:.||.|::|||  .:|...:
  Fly   425 SLLQYYQRPEWE-----------------------------LYDIKTDPLERFNLADKAKYNGTL 460

  Fly   504 NALMTEL 510
            ..|..:|
  Fly   461 KQLREQL 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8646NP_610807.3 AslA 25..459 CDD:225661 108/510 (21%)
4-S 26..405 CDD:293753 99/445 (22%)
DUF4976 <462..531 CDD:303608 11/51 (22%)
SgshNP_650760.1 AslA 17..476 CDD:225661 120/568 (21%)
SGSH 22..471 CDD:293751 119/563 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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