DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8646 and Ids

DIOPT Version :9

Sequence 1:NP_610807.3 Gene:CG8646 / 36394 FlyBaseID:FBgn0033763 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_647814.1 Gene:Ids / 38423 FlyBaseID:FBgn0035445 Length:512 Species:Drosophila melanogaster


Alignment Length:555 Identity:121/555 - (21%)
Similarity:207/555 - (37%) Gaps:163/555 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LICLLLPI-IDAAEVEKSPAKPNIIFILADDLGFNDVGFHGSAEIPTPNIDALAYSGIILNRYY- 68
            |:.|::|: :|||   ..|.:||::.::.|||. ..:|.:|.....||.:|..|....|..|.| 
  Fly     7 LLSLMMPVLLDAA---APPRRPNVVMVIFDDLR-PVIGAYGDTLASTPYLDNFARGSHIFTRVYS 67

  Fly    69 VAPICTPSRSALMTGKYPIHTGMQHTVLYAAEPRGLPLEEKILPQYLNELGYTSHIAGK-WHLG- 131
            ...:|.|||::|:||:.|   ...|...:.:..|........||||..|.||.::..|| :|.| 
  Fly    68 QQSLCAPSRNSLLTGRRP---DTLHLYDFYSYWRTFTGNFTTLPQYFKEHGYYTYSCGKVFHPGL 129

  Fly   132 ----------HWKLKYTPLYRGFSSH--------------------------------------- 147
                      .|.   .|.:|..:..                                       
  Fly   130 SSNNTDDYPLSWS---APAFRPRTEQFMNSPVCPDKEGILRKNLICPVELQTQPYKTLPDIESVA 191

  Fly   148 -----VGFWSGHQDYNDHTAVENNQWGLDMRNGTQV--AYDLHG--HYTTDVITDHSVKVIANHN 203
                 ||..|.|.......|:..::..::.|...|.  .::|..  :||.|.:....:..:|.:.
  Fly   192 EALRFVGSRSRHSQEPFFLAMGFHKPHINFRFPRQFLSRFNLSQFYNYTEDSLKPPDMPAVAWNP 256

  Fly   204 ATKGPLFLYVAHAACHS--SNPYNPLPVPDNDVIKMSHIPNYKRRKFAAMVSKMDNSVGQIVDQL 266
            .|.    :.......||  |.||.|:     ..::.:.|    |:.:.|.||.:|:..|:::..|
  Fly   257 YTD----VRARDDFKHSNISFPYGPI-----SPLQAAQI----RQSYYASVSYVDDLFGKLIGGL 308

  Fly   267 RKSNMLENSIIIFSSDNGGPAQGFNLNFASNYPLKGVKNTLWEGGVRAAGLMWSPLLKKSQ-RVS 330
            .    |:.::::...|:|. :.|.:..:|        |.:.:|..:|...::.||....:| :..
  Fly   309 D----LDETVVVALGDHGW-SLGEHAEWA--------KYSNFEVALRVPLIIRSPQFPVAQTKYY 360

  Fly   331 NQTMHIIDWLPTLLEAAGGQPALSNL--SKQI---DGQSIWRALV-------------------- 370
            :....::|..|||::.| |.|.|...  |:::   :|:|::..|:                    
  Fly   361 HGITELLDVFPTLVDLA-GLPKLDKCQSSQELTCGEGKSLYHQLMGLGRADEHVALSQYPRPGML 424

  Fly   371 ------QDKASPRLNVLHNI--------DDIWGSAALSVGDWKLVKGTNYRGSWDGWYGPAGERD 421
                  .||  |:   |.||        .||:....     |......|:...|...||      
  Fly   425 PTKHPNSDK--PK---LRNIKIMGYSLRTDIYRYTM-----WVRFHAQNFSRDWHDVYG------ 473

  Fly   422 PRLYDWQLVGRSRAGKALEALKMLPSRAD-QQRIR 455
            ..|||.:|    .:|:.|. |..||...| :||:|
  Fly   474 EELYDHRL----DSGEELN-LMPLPQFDDVRQRLR 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8646NP_610807.3 AslA 25..459 CDD:225661 114/535 (21%)
4-S 26..405 CDD:293753 97/481 (20%)
DUF4976 <462..531 CDD:303608
IdsNP_647814.1 AslA 21..509 CDD:225661 115/538 (21%)
iduronate-2-sulfatase 24..495 CDD:293754 110/525 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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