DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8646 and gnsb

DIOPT Version :9

Sequence 1:NP_610807.3 Gene:CG8646 / 36394 FlyBaseID:FBgn0033763 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_956135.2 Gene:gnsb / 327635 ZFINID:ZDB-GENE-030131-5846 Length:507 Species:Danio rerio


Alignment Length:418 Identity:100/418 - (23%)
Similarity:169/418 - (40%) Gaps:111/418 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWFLWLICLLLPIIDAAEVEKSPAKPNIIFILADDLGFNDVGFHGSAEIPTPNIDALAYSGIIL- 64
            ::|.:..|..            .:|.|||.||.||   .|....|...:.... :.:..:|... 
Zfish    20 LFFFFFTCAF------------SSKNNIILILTDD---QDEQMGGMTPMKKTR-ELIGDAGATFS 68

  Fly    65 NRYYVAPICTPSRSALMTGKYPIHTGMQHTVLY-----------AAEPRGLPLEEKILPQYLNEL 118
            |.:...|:|.||||:.::|:|| |..:.|....           .|||...|:       |||::
Zfish    69 NAFTSTPLCCPSRSSFLSGRYP-HNHLVHNNSVEGNCSSAAWQKTAEPFAFPV-------YLNKM 125

  Fly   119 GYTSHIAGKWHLGHWKLKYTPLYRGFSSHV--GF--WS---GHQDYNDHTAVENNQWGLDMRNGT 176
            .|.:...|| :|..:..|..    |..:||  |:  |.   |:..|.::|...|   |.:.::|.
Zfish   126 RYQTFYCGK-YLNQYGSKDA----GGVAHVPPGWDQWHALVGNSKYYNYTLSVN---GKEEKHGD 182

  Fly   177 QVAYDLHGHYTTDVITDHSVKVIANHNATKGPLFLYVAHAACHS--------------------- 220
            ....|    |.||::.:.|:..:...:.:. |.|:.:...|.||                     
Zfish   183 SYEKD----YLTDLVLNRSLHFLEERSPSH-PFFMMLCPPAPHSPWTAAPQYSGSFSGVKAPRNG 242

  Fly   221 -------------SNPYNPLPVPDNDVIKMSHIPNYKRRKFAAMVSKMDNSVGQIVDQLRKSNML 272
                         ..|.||:|....|     ::.|..||::..::| :|:.|.:::.:|.....|
Zfish   243 SFNKPGTDKHWLLRQPANPMPNSSID-----YLDNAFRRRWQTLLS-VDDLVERLLKKLDSVKEL 301

  Fly   273 ENSIIIFSSDNGGPAQGFNLNFASNYPLKGVKNTLWEGGVRAAGLMWSPLLKKSQRVSNQTMHII 337
            :|:.|.::||:|.....|:|      |:.  |..|:|..:|...|:..|.:|..|.:.:..:: |
Zfish   302 DNTYIFYTSDHGYHTGQFSL------PID--KRQLYEFDIRIPLLVRGPGIKAKQTLQSPVLN-I 357

  Fly   338 DWLPTLLEAAGGQPALSNLSK-QIDGQS 364
            |...|:|:.||     .|||. .:||||
Zfish   358 DLPMTILDIAG-----VNLSTVNMDGQS 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8646NP_610807.3 AslA 25..459 CDD:225661 98/394 (25%)
4-S 26..405 CDD:293753 97/393 (25%)
DUF4976 <462..531 CDD:303608
gnsbNP_956135.2 AslA 34..496 CDD:225661 97/392 (25%)
G6S 34..480 CDD:293766 97/392 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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