DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8646 and Arsa

DIOPT Version :9

Sequence 1:NP_610807.3 Gene:CG8646 / 36394 FlyBaseID:FBgn0033763 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001030105.2 Gene:Arsa / 315222 RGDID:1310381 Length:507 Species:Rattus norvegicus


Alignment Length:560 Identity:153/560 - (27%)
Similarity:221/560 - (39%) Gaps:149/560 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SPAKPNIIFILADDLGFNDVGFHGSAEIPTPNIDALAYSGIILNRYYV-APICTPSRSALMTGKY 85
            ||  |||:.|.|||||:.|:|.:|.....|||:|.||..|:....:|| ..:|||||:||:||:.
  Rat    19 SP--PNIMLIFADDLGYGDLGSYGHPSSTTPNLDQLAAGGLRFTDFYVPVSLCTPSRAALLTGRL 81

  Fly    86 PIHTGMQHTVLYAAEPRGLPLEEKILPQYLNELGYTSHIAGKWHLGHW-KLKYTPLYRGFSSHVG 149
            |:.:||...||..:...||||||..|.:.|...||.:.:|||||||.. :..:.|.::||...:|
  Rat    82 PVRSGMYPGVLGPSSQGGLPLEEVTLAEVLAARGYLTGMAGKWHLGVGPEGAFLPPHQGFHRFLG 146

  Fly   150 FWSGHQDYNDHTAVEN---------NQWGLD--------MRNGTQVAY-----DLHGHYTTDVIT 192
            ....|    |....:|         ...|.|        :.|.|..|.     .|...|.:    
  Rat   147 IPYSH----DQGPCQNLTCFPPDITCSGGCDQGLVPIPLLANLTVEAQPPWLPGLEARYVS---- 203

  Fly   193 DHSVKVIANHNATKGPLFLYVAHAACHSSNPYNPLPVPDNDVIKMSHIPNYK---------RRKF 248
             .|..::|:......|.|||  :|:.|                  :|.|.:.         |..|
  Rat   204 -FSRDLMADAQRQGRPFFLY--YASHH------------------THYPQFSGQSFTKRSGRGPF 247

  Fly   249 AAMVSKMDNSVGQIVDQLRKSNMLENSIIIFSSDNG--------GPAQGFNLNFASNYPLKGVKN 305
            ...:.::|.:||.::..:....:|..:::||::|||        |...|.         |:..|.
  Rat   248 GDSLMELDGAVGALMTAVGDLGLLGETLVIFTADNGPELMRMSDGGCSGL---------LRCGKG 303

  Fly   306 TLWEGGVRAAGLMWSPLLKKSQRVSNQTMHIIDWLPTLLEAAGGQPALSNLSKQIDGQSIWRALV 370
            |.:|||||...|::.| ...:..|:::....:|.||| |.|..|.| |.|::  :||..|...|:
  Rat   304 TTFEGGVREPALVYWP-GHITPGVTHELASSLDLLPT-LAALTGAP-LPNIT--LDGVDISPLLL 363

  Fly   371 QDKASPRLNVLHN---IDDIWGSAALSVGDWKLVKGTNYRGSWDGWYGPAGERDPRLYDWQLVGR 432
            ....|||.:|...   .|:|.|..|:..|.:|....|......|....||.....||        
  Rat   364 GTGKSPRNSVFFYPPFPDEIHGVFAVRNGKYKAHFFTQGSAHSDTTPDPACHAANRL-------- 420

  Fly   433 SRAGKALEALKMLPSRADQQRIRAAATVSCPGQSSQGTSCVATAFSAPCLFHIRDDPCEQYNL-- 495
                                                      ||...|.|:.:..||.|.|||  
  Rat   421 ------------------------------------------TAHEPPLLYDLSKDPGENYNLLD 443

  Fly   496 --AKQYPEVVNAL----MTELERFNATAVPPSN--KPADP 527
              .:..||.:.||    :.:.|...|....||.  |..||
  Rat   444 STEEVSPEALQALKHIELLKAEYDAAMTFSPSQIAKGEDP 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8646NP_610807.3 AslA 25..459 CDD:225661 130/477 (27%)
4-S 26..405 CDD:293753 124/422 (29%)
DUF4976 <462..531 CDD:303608 21/76 (28%)
ArsaNP_001030105.2 AslA 17..470 CDD:225661 147/545 (27%)
ALP_like 20..503 CDD:304875 152/559 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.