DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8646 and Sgsh

DIOPT Version :9

Sequence 1:NP_610807.3 Gene:CG8646 / 36394 FlyBaseID:FBgn0033763 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_061292.2 Gene:Sgsh / 27029 MGIID:1350341 Length:502 Species:Mus musculus


Alignment Length:520 Identity:116/520 - (22%)
Similarity:195/520 - (37%) Gaps:181/520 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NIIFILADDLGFNDVGFHGSAEIPTPNIDALA-YSGIILNRYYVAPICTPSRSALMT-------G 83
            |::.|:|||.|| :.|.:.:..|.||::|||: :|.|..|.:.....|:|||::|:|       |
Mouse    24 NVLLIVADDGGF-ESGVYNNTAIATPHLDALSRHSLIFRNAFTSVSSCSPSRASLLTGLPQHQNG 87

  Fly    84 KYPIHTGMQHTVLYAAEPRGLPLEEKI--LPQYLNELGYTSHIAGKWHLGHWKLKYTPLYRGFSS 146
            .|.:|..:.|...:          :|:  ||..||:.|..:.|.||.|:|. :..| |.      
Mouse    88 MYGLHQDVHHFNSF----------DKVQSLPLLLNQAGVRTGIIGKKHVGP-ETVY-PF------ 134

  Fly   147 HVGFWSGHQDYNDHTAVENNQWGLDM-RNGTQVAYDLHGHYTTDVITDHSVKVIANHNATKG--P 208
                        |....|.|...:.: ||.|::.                 :::.....|:.  |
Mouse   135 ------------DFAFTEENSSVMQVGRNITRIK-----------------QLVQKFLQTQDDRP 170

  Fly   209 LFLYVA----HAACHSSNPYNPL------------PVPD--------NDVIKMSHIPN--YKRRK 247
            .|||||    |...||...|...            .:||        .||:....:|:  ..|..
Mouse   171 FFLYVAFHDPHRCGHSQPQYGTFCEKFGNGESGMGYIPDWTPQIYDPQDVMVPYFVPDTPAARAD 235

  Fly   248 FAAM---VSKMDNSVGQIVDQLRKSNMLENSIIIFSSDNGGPAQGFNLNFASNYPLKGVKNTLWE 309
            .||.   :.:||..||.::.:||.:.:|.:::|||:||||.|           :| .|..|..|.
Mouse   236 LAAQYTTIGRMDQGVGLVLQELRGAGVLNDTLIIFTSDNGIP-----------FP-SGRTNLYWP 288

  Fly   310 GGVRAAGLMWSPLLKKS----QR---VSNQTMHIIDWLPTLLE---------AAGGQPALS---- 354
            |..       .|||..|    ||   ||:..:.::|..||:|:         |..|...:.    
Mouse   289 GTA-------EPLLVSSPEHPQRWGQVSDAYVSLLDLTPTILDWFSIPYPSYAIFGSKTIQLTGR 346

  Fly   355 NLSKQIDGQSIWRALVQDKASPRLNVLHNIDDIWGSAALSVGDWKLVKGTNYR------------ 407
            :|...::.:.:|..:...::...:.:.:.:..::..      :::|:...:::            
Mouse   347 SLLPALEAEPLWATVFSSQSHHEVTMSYPMRSVYHQ------NFRLIHNLSFKMPFPIDQDFYVS 405

  Fly   408 ------------GSWDGWYGPAGERDPRLY----DWQLVGRSR-------------AGKALEALK 443
                        |...|||     :|...|    .|:|...||             ..:.||.||
Mouse   406 PTFQDLLNRTTTGRPTGWY-----KDLHRYYYRERWELYDISRDPRETRNLAADPDLAQVLEMLK 465

  Fly   444  443
            Mouse   466  465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8646NP_610807.3 AslA 25..459 CDD:225661 116/520 (22%)
4-S 26..405 CDD:293753 102/439 (23%)
DUF4976 <462..531 CDD:303608
SgshNP_061292.2 AslA 20..464 CDD:225661 114/517 (22%)
SGSH 24..472 CDD:293751 116/520 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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