DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8646 and arsb

DIOPT Version :9

Sequence 1:NP_610807.3 Gene:CG8646 / 36394 FlyBaseID:FBgn0033763 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_021324609.1 Gene:arsb / 100538007 ZFINID:ZDB-GENE-111123-2 Length:502 Species:Danio rerio


Alignment Length:561 Identity:198/561 - (35%)
Similarity:290/561 - (51%) Gaps:118/561 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LWLICLLLPIIDAAEVEKSPAKPNIIFILADDLGFNDVGFHGSAEIPTPNIDALAYSGIILNRYY 68
            |.|:|::|..:.|       ..|:::.|||||||:|||||||| ||.||::|.||..|:.|:.||
Zfish     8 LCLLCVVLECVSA-------RPPHVVLILADDLGWNDVGFHGS-EIKTPHLDRLAAQGVRLDNYY 64

  Fly    69 VAPICTPSRSALMTGKYPIHTGMQHTVLYAAEPRGLPLEEKILPQYLNELGYTSHIAGKWHLGHW 133
            |.|:|||||:.||||:|.|.||:||.:::..:|..:||:||:|||.|.|.||.:|:.||||||.:
Zfish    65 VQPLCTPSRNQLMTGRYQIRTGLQHQIIWPCQPYCVPLDEKLLPQVLRERGYHTHMVGKWHLGMF 129

  Fly   134 KLKYTPLYRGFSSHVGFWSGHQDYNDH------TAVENNQWGLDMRNGTQVAYDLHGHYTTDVIT 192
            :....|.:|||.|..|:.:|.:||..|      ..:...:..||:|:|..||.:..|.|:|:::|
Zfish   130 QKDCLPTHRGFQSFFGYLTGSEDYYTHKRCSPIAPLNVTRCALDLRDGDAVALNYSGRYSTELLT 194

  Fly   193 DHSVKVIANHNATKGPLFLYVAHAACHSSNPYNPLPVPDNDVIKMSHIPNYKRRKFAAMVSKMDN 257
            :.:..:|..|...: |||||||..|.|:     ||.|||:.:...|.|.:..||::|.|||.||.
Zfish   195 ERATHIITQHTPDQ-PLFLYVALQAVHA-----PLQVPDHYIAPYSFIQDPHRRRYAGMVSAMDE 253

  Fly   258 SVGQIVDQLRKSNMLENSIIIFSSDNGGPAQGFNLNFASNYPLKGVKNTLWEGGVRAAGLMWSPL 322
            :||.|...|:::.:.:|:::|||:||||.    .|...:|:||:|.|.||||||||....:..||
Zfish   254 AVGNITHTLQETGLWDNTVLIFSTDNGGQ----TLYGGNNWPLRGRKWTLWEGGVRGVAFVSGPL 314

  Fly   323 LKKSQRVSNQTMHIIDWLPTLLEAAGGQPALSNLSKQIDGQSIWRALVQDKASPRLNVLHNIDDI 387
            ::|...|:.:.:||.|||||:...||   |.:|.:|.:||..:|:::....||||:.:|||||.:
Zfish   315 IEKPGAVNRELIHISDWLPTIAGLAG---ASTNGTKPLDGFDVWQSISAGVASPRVELLHNIDPL 376

  Fly   388 WGS---------------------------------------AALSVGDWKLVKGTNYRGSWDGW 413
            :..                                       ||:...:|||:  |.|.|. ..|
Zfish   377 YEDSSPCPGGEGVFLEDSLHSSSSSSSSSSSDVSAQFNISIHAAIRHKNWKLL--TGYPGC-PLW 438

  Fly   414 YGPAGERDPRLYDWQLVGRSRAGKALEALKMLPSRADQQRIRAAATVSCPGQSSQGTSCVATAFS 478
            ..|.|              .|...|.|.||.:                                 
Zfish   439 IPPPG--------------GRPVNASEPLKQV--------------------------------- 456

  Fly   479 APCLFHIRDDPCEQYNLAKQYPEVVNALMTELERFNATAVP 519
              .||.:..||.|:..::.|.||||:.|:..|:.....|.|
Zfish   457 --MLFDVEKDPEERLEVSHQRPEVVSFLLRRLQLCQNQAQP 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8646NP_610807.3 AslA 25..459 CDD:225661 179/478 (37%)
4-S 26..405 CDD:293753 168/423 (40%)
DUF4976 <462..531 CDD:303608 14/58 (24%)
arsbXP_021324609.1 4-S 23..472 CDD:293753 184/514 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 294 0.414 Domainoid score I1467
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 351 1.000 Inparanoid score I2236
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D375140at33208
OrthoFinder 1 1.000 - - FOG0000852
OrthoInspector 1 1.000 - - mtm6503
orthoMCL 1 0.900 - - OOG6_100690
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X499
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.870

Return to query results.
Submit another query.