DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8646 and arsh

DIOPT Version :10

Sequence 1:NP_610807.3 Gene:CG8646 / 36394 FlyBaseID:FBgn0033763 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_003199313.1 Gene:arsh / 100332997 ZFINID:ZDB-GENE-081104-120 Length:583 Species:Danio rerio


Alignment Length:587 Identity:142/587 - (24%)
Similarity:225/587 - (38%) Gaps:163/587 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 AKPNIIFILADDLGFNDVGFHGSAEIPTPNIDALAYSGIILNRYY-VAPICTPSRSALMTGKYPI 87
            ::||.:.::.||||..|:|.:|:..|.|||||.||..|:.|..:. .||:|||||:|.|||:||:
Zfish    32 SRPNFVLMMVDDLGIGDIGCYGNTTIRTPNIDRLASDGVKLTHHLSAAPLCTPSRTAFMTGRYPL 96

  Fly    88 HTGMQHT-----VLYAAEPRGLPLEEKILPQYLNELGYTSHIAGKWHLG-----HWKLKYTPLYR 142
            ..||..|     :|:.|...|||..|....:.|.:.|||:.|.||||||     ...|.:.|...
Zfish    97 RAGMGSTGRVQVILFLAGSGGLPPNETTFAKLLQKQGYTTGIVGKWHLGVNCESRSDLCHHPNNH 161

  Fly   143 GF------------SSHVGFWSG-HQDYND---------------------------------HT 161
            ||            ...||..|| ..||.:                                 |.
Zfish   162 GFDFFYGLPFTLFVDCAVGAGSGVLLDYQEMLLNSCKLLLVCVLTLLALRGSGLLCAGWRLLFHL 226

  Fly   162 AVEN--------------NQWG-LDMRNGTQVAYDLHGHYTTDVITDHSVKVIANHNATKGPLFL 211
            :...              ..|. :.||||..|...::.......:...:.:.:..|.  .||..|
Zfish   227 SAAALICFLLWFVPFGLLRVWNCILMRNGEVVEQPMNLQTLNSRLMREAEQFMERHR--DGPFLL 289

  Fly   212 YVAHAACHSSNPYNPLPVPDNDVIKMSHIPNYKRRKFAAMVSKMDNSVGQIVDQLRKSNMLENSI 276
            :|:....|:     |:.|.:....|..|      ..:...|.::|..||::||.:.:..:.|.::
Zfish   290 FVSFPQVHT-----PMLVTEGFAGKSRH------GLYGDNVEEVDWMVGRVVDTIDRLGLTEKTL 343

  Fly   277 IIFSSDNG-----GPAQGFNLNFASNYPLKGVKNTLWEGGVRAAGLM-WSPLLKKSQRVSNQTMH 335
            :.|:||:|     ||..|:|..:.....:.|     |:||:|..|:. |...|...:.|:..| .
Zfish   344 LYFTSDHGGGIEEGPRGGWNGIYRGGKAMGG-----WDGGIRVPGIFRWPGRLAAGREVAEPT-S 402

  Fly   336 IIDWLPTLLEAAGGQPALSNLSKQIDGQSIWRALVQDKASPRLNVLHNIDDIWGSAALSVGDWKL 400
            ::|..||:::.|||:.....|   :||..:                                ..|
Zfish   403 LMDVFPTVVKLAGGELPKDRL---LDGHDL--------------------------------MPL 432

  Fly   401 VKGTNYRGSWDGWYGPAGERDPRLYDWQLVGRSRAGKALEALKMLPSRADQ-QRIRAAATVSCPG 464
            ::|::.|...:..:...|     :|             |.|::..|..:.. .::...:.|..|.
Zfish   433 LEGSSSRSQHEFMFHYCG-----MY-------------LNAVRWHPQNSSSIYKVVFFSPVFSPA 479

  Fly   465 QSS---QGTSCV-----ATAFSAPCLFHIRDDPCEQYNLAKQ----YPEVVNALMTELERFNATA 517
            .||   ...||:     .|..|.|.:|.|..||.|...|.:|    .|||:..:...:|....:.
Zfish   480 GSSGCFSTGSCMCHKPHVTYHSPPLVFLISSDPSESVPLTEQTDPRVPEVLQRVQRAVEEHRRSL 544

  Fly   518 VP 519
            .|
Zfish   545 TP 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8646NP_610807.3 4-S 26..405 CDD:293753 115/456 (25%)
DUF4976 <480..510 CDD:419068 11/33 (33%)
arshXP_003199313.1 ALP_like 33..553 CDD:474031 142/586 (24%)

Return to query results.
Submit another query.