DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8778 and CHY1

DIOPT Version :10

Sequence 1:NP_610805.1 Gene:CG8778 / 36392 FlyBaseID:FBgn0033761 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_201395.1 Gene:CHY1 / 836724 AraportID:AT5G65940 Length:378 Species:Arabidopsis thaliana


Alignment Length:190 Identity:48/190 - (25%)
Similarity:81/190 - (42%) Gaps:14/190 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 TEVLVERLDGARQGISVIGLNRPAAKNSFSRGMVETFNDVLEDIKKDNGSRVVVLRSLSPGIFCA 99
            ::||||.    :..:.::.||||...|:.|..|:.....:....::|...::|:|:..... |||
plant     9 SQVLVEE----KSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRA-FCA 68

  Fly   100 GADLKE-----RKGMTPEEATEFVKELRGLLIAIEQLPMPVIAAVDGAALGGGLEMALACDIRTA 159
            |.|:..     .:|.....|..|..|.. |...:.......::.::|..:|||..:::....|.|
plant    69 GGDVAAVVRDINQGNWRLGANYFSSEYM-LNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIA 132

  Fly   160 ASDTKMGLVETRLAIIPGAGGTQRLPRILSPALAKELI-FTARVFNGAEAKDLGLVNHVV 218
            ..:|...:.||.|.:.|..|.:..|.|:  |....|.: .|....:|||....||..|.|
plant   133 TENTVFAMPETALGLFPDVGASYFLSRL--PGFFGEYVGLTGARLDGAEMLACGLATHFV 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8778NP_610805.1 crotonase-like 48..299 CDD:474030 44/177 (25%)
CHY1NP_201395.1 crotonase-like 1..378 CDD:474030 48/190 (25%)

Return to query results.
Submit another query.