DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8778 and ech-1.1

DIOPT Version :9

Sequence 1:NP_610805.1 Gene:CG8778 / 36392 FlyBaseID:FBgn0033761 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_506810.1 Gene:ech-1.1 / 180037 WormBaseID:WBGene00001150 Length:755 Species:Caenorhabditis elegans


Alignment Length:288 Identity:79/288 - (27%)
Similarity:143/288 - (49%) Gaps:33/288 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSMLIKRASGLARQLARPLVASRNLASAAPYGDGTEVLVERLDGARQG-ISVIGLNRP-AAKNSF 63
            :|.::.|:|.:.|     ...|..|.|.:.:...:...||     :|| ::|:.::.| ..:|..
 Worm     2 LSRVVHRSSSVFR-----TNLSFRLFSQSAFAVHSTHRVE-----KQGDVAVMKIDLPNTTENVL 56

  Fly    64 SRGMVETFNDVLEDIKKDNGSRVVVLRSLSPGIFCAGADLKERKG-MTPEEATEFVKELRGLLIA 127
            ::.:....|:.|:.::.|...:.:|:.|..|..|.||||::..|. .|....:..::|.:..|:.
 Worm    57 NKALFAEMNETLDRLQSDQSVKAIVVMSGKPNSFVAGADIQMFKAEKTAAGVSNLLREGQKQLLT 121

  Fly   128 IEQLPMPVIAAVDGAALGGGLEMALACDIRTAASDTK--MGLVETRLAIIPGAGGTQRLPRILSP 190
            ||....|::||:.|:.:|||||:||||..|.|.:|.|  :||.|..|.|:||.|||||||::.:.
 Worm   122 IELSQKPIVAAIMGSCMGGGLEIALACHYRIAVNDKKTLLGLPEVTLGIMPGDGGTQRLPKLTTV 186

  Fly   191 ALAKELIFTARVFNGAEAKDLGLVNHVVK--------QNET-----QDAAYQQALKLAEEILPNG 242
            ....:|..|.:.....:|..:|:|:.|::        ..||     ::.|.|.|.:||     ||
 Worm   187 QNVLDLTLTGKRIKANKAMKIGIVDRVIQPLGDGICTSTETTHKYLEEIAVQSARELA-----NG 246

  Fly   243 PVGVRMAKLAIDKGMQVDLATGYSIEEI 270
            .:.:...|..:....|..:.:.:.::.:
 Worm   247 KLKINRDKGFVHNATQAVMTSKFVLDNV 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8778NP_610805.1 crotonase-like 48..299 CDD:304874 69/241 (29%)
ech-1.1NP_506810.1 fa_ox_alpha_mit 20..754 CDD:131494 74/265 (28%)
crotonase-like 34..216 CDD:119339 61/186 (33%)
3HCDH_N 355..533 CDD:280833
3HCDH 535..630 CDD:279114
3HCDH 668..754 CDD:279114
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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