DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8785 and slc38a2

DIOPT Version :9

Sequence 1:NP_610804.1 Gene:CG8785 / 36391 FlyBaseID:FBgn0033760 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001011056.1 Gene:slc38a2 / 496466 XenbaseID:XB-GENE-6258676 Length:493 Species:Xenopus tropicalis


Alignment Length:464 Identity:91/464 - (19%)
Similarity:186/464 - (40%) Gaps:107/464 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 PNGASAGGALAHLLKSSLGTGILAMPMAFHNAGLAFGMAMTLIVGFLCTHCVHILVKTSHDICRD 124
            |...|.|.::.:|..:.:|:|||.:..|..|.|:|..|.:.:.|.....:.:|:|:||:::    
 Frog    64 PGTTSFGMSVFNLSNAIVGSGILGLSYAMANTGIALFMILLVFVTVFSLYSIHLLLKTANE---- 124

  Fly   125 AKVSALGFAETAEKVFEYGPKGMRPYSNFAKQFVDIGLMATYYAAACVYIV-----FIATSFHDV 184
              ..:|.:.:...|.|  |..|....|. :....:||.|::|     :|||     .:..:..|:
 Frog   125 --GGSLLYEQLGLKAF--GIPGKLAASG-SVTLQNIGAMSSY-----LYIVKYELPLVIKALMDI 179

  Fly   185 --INYDLKINWD-VRIYIALTVI-PCLLIGQIRDLKWLVPFSMMANIFIVVTFAITLYYMFDEPL 245
              .|.:..:|.| :.|.::|.:| |..|:..:..|.:...||.:..:|.::   :.:|..|:.|.
 Frog   180 KESNGEWYLNGDYLVIMVSLAIILPLSLLRNLGYLGYTSGFSPLCMVFFLI---VVIYKKFEIPC 241

  Fly   246 VYSDKPLIAKAA---HI-----------PLFF---ATVIFAMEGI-------GVVMPVENSM--R 284
            ......:.:.::   |:           |.:|   :..::|:..:       ..|:|:...:  |
 Frog   242 PLEAMNMTSNSSSHDHMAHNETDDEMCKPKYFVFNSQTVYAVPILTFSFVCHPAVLPIYQELKGR 306

  Fly   285 KPQHFLGCPGVLNIAMVTVVSLYAIIGFFGYVRFGDQVRGSI--TLNLPEGA---WLGDTAKLLM 344
            ..:..:   .|.|::...:..:|.:...|||:.|..:|...:  |.:...||   ::.....:||
 Frog   307 SRRRMM---NVSNVSFFAMFIMYLLAALFGYLTFYSKVEPELLHTYSKVFGAGVIFVVVRLAVLM 368

  Fly   345 AVAI---------------LFTFGLQFYVPNEILWRKISHKFSPEKHNITQILLRSGIILLSGGV 394
            ||.:               ||..|..|      .|             |..||:...|:..:..:
 Frog   369 AVTLTVPIVIFPIRSSLNELFCSGKDF------AW-------------IRHILITFLILAFTNVL 414

  Fly   395 AAAIPNLEPFISLVGAVFFSLLGIFVPS--FVETVYLWPDRLGVCKWKLVKNIFLGVFSILALVA 457
            ...:|.:......:||...::|...:||  ::..|          |.:.:|:: ..:.::|.|:.
 Frog   415 VIFVPTIRDIFGFIGASAAAMLVFILPSAFYIRLV----------KKESMKSV-QKIGALLFLIG 468

  Fly   458 GAVASINEI 466
            |.:..|..:
 Frog   469 GIIVMIGSM 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8785NP_610804.1 SdaC 60..457 CDD:223884 89/453 (20%)
SLC5-6-like_sbd 62..463 CDD:294310 89/457 (19%)
slc38a2NP_001011056.1 Regulates protein turnover upon amino acid deprivation. /evidence=ECO:0000250 1..92 8/27 (30%)
SdaC 63..485 CDD:223884 91/464 (20%)
SLC5-6-like_sbd 65..482 CDD:294310 90/463 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.