DRSC/TRiP Functional Genomics Resources

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Protein Alignment Iswi and smarcad1a

DIOPT Version :9

Sequence 1:NP_523719.1 Gene:Iswi / 36390 FlyBaseID:FBgn0011604 Length:1027 Species:Drosophila melanogaster
Sequence 2:NP_001018610.2 Gene:smarcad1a / 557875 ZFINID:ZDB-GENE-050522-499 Length:972 Species:Danio rerio


Alignment Length:611 Identity:216/611 - (35%)
Similarity:322/611 - (52%) Gaps:108/611 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KEAEF-DNKIEADRSRRFDFLLKQTEIFTHFMTNSAKSPTKPKGRPKKIKDKDKEKDVADHRHRK 94
            ||..| ||.:..|.......:||:.::....|           ||.:||..| ..|||.      
Zfish   380 KEQFFKDNGLSIDLVHGCKVVLKERQVVLDLM-----------GRCEKIAQK-MTKDVT------ 426

  Fly    95 TEQEEDEELLAEDSATKEIFRFDASPAYIKSG-EMRDYQIRGLNWMISLYENGINGILADEMGLG 158
                  :.:.|...:.|:       |..:.|. :::.||:.||.|:|.|:::.::||||||||||
Zfish   427 ------QVIEAGMGSIKQ-------PKVLNSNLKLQAYQLIGLKWLILLHQHKLSGILADEMGLG 478

  Fly   159 KTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVL 223
            ||:|.|:.|.:| :.|...|||::.||.|||.|||.|...|||||:.:...|..:.|. ::|..:
Zfish   479 KTIQAIAFLAHL-YEKGIKGPHLITVPSSTLDNWVRELGLWCPSLKVLIYYGSVEDRK-YLRQDI 541

  Fly   224 MPG--EWDVCVTSYEMCI---REKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLI 283
            :.|  ::::.|::|.:.|   .::|:|:|...:|.|.||.|.:||..|.....|......:|||:
Zfish   542 LTGLIDFNIIVSTYNLTIGNDHDRSLFRKLKLKYAVFDEGHMLKNMNSLRYRHLMTINAEHRLLL 606

  Fly   284 TGTPLQNNLHELWALLNFLLPDVFNSS-EDFDEWFNTNTCLGDDAL----ITRLHAVLKPFLLRR 343
            |||||||||.||.:||||::|.:|:|| ....:.|:|.:...:.:.    |.:...::|||:|||
Zfish   607 TGTPLQNNLLELMSLLNFIMPSMFSSSTSQISKMFSTRSSEEESSFHKDRIAQARLIMKPFILRR 671

  Fly   344 LKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDI-DVVNGAGKVEKMRLQNILMQLRKCTNH 407
            :|:||.|.|.||.|......:|..|...| .:|.|.: ...||    :|..|.|::|||||..||
Zfish   672 VKSEVLKELPPKMEKIEMCPMSDAQHKLY-DILFKRLKKTPNG----DKRELCNVMMQLRKMANH 731

  Fly   408 PYLFDGAEPGPPYTTD-------------TH---------------------------------- 425
            |.|.     ...||:|             ||                                  
Zfish   732 PLLH-----RQYYTSDKLAAMSKAMLKEPTHYDADPALIQEDMEVMSDFELHNLCREYSSISGFQ 791

  Fly   426 ----LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDR 486
                |:.:|||.|:|.|.|.||:|:|.||::|||.|.||||:|......::.|.||||.||..:|
Zfish   792 LEKALILDSGKFALLTKTLAKLKEKGDRVVLFSQFTMMLDIVEILLKHLDHQYVRLDGSTPMAER 856

  Fly   487 NRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVR 551
            ...|.::| .|...|:|:|||||||.|||||:|:.||::|.|.||..|.||.||.||:||.:.|:
Zfish   857 IGLIDKYN-TNPEIFVFLLSTRAGGQGINLASANTVILHDIDCNPFNDKQAEDRCHRMGQTRTVQ 920

  Fly   552 VFRLITESTVEEKIVERAEVKLRLDK 577
            |.:||::.::|:.::...:.||:|::
Zfish   921 VIKLISKDSIEDCMLRVGQEKLKLEQ 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IswiNP_523719.1 DBINO <30..67 CDD:290603 9/36 (25%)
SNF2_N 131..411 CDD:278600 117/290 (40%)
DEXDc 148..287 CDD:238005 58/143 (41%)
HELICc 422..553 CDD:238034 68/181 (38%)
HAND 697..796 CDD:286232
SANT 797..838 CDD:197842
SANT 799..838 CDD:238096
SLIDE 853..965 CDD:286233
smarcad1aNP_001018610.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..76
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 125..177
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 217..333
SNF2_N 451..734 CDD:278600 117/289 (40%)
DEXDc 468..610 CDD:238005 58/143 (41%)
DEGH box 579..582 2/2 (100%)
Helicase_C 800..914 CDD:278689 61/114 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D61251at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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