DRSC/TRiP Functional Genomics Resources

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Protein Alignment Iswi and smarcad1

DIOPT Version :10

Sequence 1:NP_523719.1 Gene:Iswi / 36390 FlyBaseID:FBgn0011604 Length:1027 Species:Drosophila melanogaster
Sequence 2:NP_001015697.1 Gene:smarcad1 / 548414 XenbaseID:XB-GENE-492700 Length:1003 Species:Xenopus tropicalis


Alignment Length:676 Identity:230/676 - (34%)
Similarity:348/676 - (51%) Gaps:125/676 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SKTDTAAVEATEENSNETTSDAAT------SSSGEK-EAEFDNKIEA---DRSRRFDFLL----- 51
            :|.||..:|     |.|:.|||.:      ||..|| |.|:..||.:   |.|....:|:     
 Frog   326 AKRDTRDLE-----SEESASDAGSCLDEDYSSGDEKLEEEYKTKILSFLQDASLDELYLIPHCSH 385

  Fly    52 KQTEIFTHFMTNSA-----KSPTKPKGRPKKI----KDKDKEKDVADHRHRKTEQEEDEELLAED 107
            |:.:..|.....|:     :..||..|..:.:    :...||::|......|.|:       ...
 Frog   386 KKAQKITELRPFSSWESLFEKMTKSNGLSEDLIWDCQTLIKEREVVMKLMNKCEE-------ISR 443

  Fly   108 SATKEIFRFDASPAYIKSGE----------------MRDYQIRGLNWMISLYENGINGILADEMG 156
            :.||::.:.      .:.||                ::.||..||||:..|:::.:|.|||||||
 Frog   444 TLTKQVTQL------TEDGECGWNIEQPSIMSENLVLKPYQKIGLNWLALLHKHKVNMILADEMG 502

  Fly   157 LGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRD 221
            ||||:|.|:.|.:| :....:|||:|:||.||:.||:.||.:||||:..:...|.|:.|.....|
 Frog   503 LGKTVQAIAFLAHL-YVTGDSGPHLVVVPASTMDNWIREFNQWCPSMNILLYYGSQEERKHLRYD 566

  Fly   222 VL-MPGEWDVCVTSYEMCI---REKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLL 282
            :| ...|::|.||:|...|   .::|:|::....:.|.||.|.:||..:...:.|......:|||
 Frog   567 ILNKVVEFNVIVTTYNCAISSAEDRSLFRRLKLNFAVFDEGHMLKNMSAIRYQHLMTLNARSRLL 631

  Fly   283 ITGTPLQNNLHELWALLNFLLPDVFNSS-EDFDEWFNTNTCLGDDALITR----LHA--VLKPFL 340
            :||||:||||.||.:||||::|.:|:|| .:....|::.....|:..|..    .||  ::|||:
 Frog   632 LTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIKRLFSSKAKSTDEQTIFEKERIAHAKQIMKPFI 696

  Fly   341 LRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKV---LLKDIDVVNGAGKVEKMRLQNILMQLR 402
            |||:|:||.|:|.||::...|..:||.|...|:.:   |.|.||...     :...|.|::|.||
 Frog   697 LRRVKSEVLKQLPPKQDKIKFCQMSKKQEQLYSDLLNKLKKSIDATE-----KNSELCNVMMHLR 756

  Fly   403 KCTNHP------YLFD----------------GAEPG------------------------PPYT 421
            |..|||      |..|                .|.|.                        ..|.
 Frog   757 KMANHPLLHRQYYTADRLRTMSKLMLKEPTHCDANPDLIFEDMEVMTDFELHRLCNEFTTLSQYK 821

  Fly   422 TDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDR 486
            .:..|:.:|||..||:|||..::::|.||::|||.|.||||:|.:.....:.|.||||:|...:|
 Frog   822 LEKELILDSGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLRHHQHRYVRLDGKTQISER 886

  Fly   487 NRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVR 551
            ...|.|||.|... |:|:|||:||||||||.:|::||::|.|.||..|.||.||.||:||.|:|:
 Frog   887 IHLIDEFNTDMDI-FIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQTKEVK 950

  Fly   552 VFRLITESTVEEKIVERAEVKLRLDK 577
            |.:||.:.|:||.:::.::.||||::
 Frog   951 VIKLIGKGTIEESMLKISQQKLRLEQ 976

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IswiNP_523719.1 PLN03142 46..967 CDD:215601 211/622 (34%)
smarcad1NP_001015697.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..130
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 172..235
CUE 223..259 CDD:270465
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 274..351 9/29 (31%)
HepA <471..974 CDD:440319 193/509 (38%)
DEGH box 605..608 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.

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