DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Iswi and Hel89B

DIOPT Version :9

Sequence 1:NP_523719.1 Gene:Iswi / 36390 FlyBaseID:FBgn0011604 Length:1027 Species:Drosophila melanogaster
Sequence 2:NP_001287351.1 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster


Alignment Length:657 Identity:207/657 - (31%)
Similarity:308/657 - (46%) Gaps:101/657 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 KTEQEEDEELLAEDSATKEIFRFDASPAYIK--------SGEMRDYQIRGLNWMISLYENGINGI 150
            ||||.:.:.|.|..:..:|...:..:|..|.        |.|:|.||..|:||:..|.:..::||
  Fly  1308 KTEQLKSDPLQARKTRDREFLDYLFNPKSIPNYKVPVPISVELRCYQQAGINWLWFLNKYNLHGI 1372

  Fly   151 LADEMGLGKTLQTISLLGYLKHFKNQAG-----PHIVIVPKSTLQNWVNEFKKWCPS---LRAVC 207
            |.|:||||||||||.:|.. .|...|..     |.:||.|.:...:||.|.:|:...   ||.:.
  Fly  1373 LCDDMGLGKTLQTICILAG-DHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLH 1436

  Fly   208 LIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIL 272
            ..|....|.....|:  ..:.::.|.||:...::...|...::.|.|:||.|.|||.|:|.|:.:
  Fly  1437 YYGFPVGREKLRSDI--GTKCNLVVASYDTVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAI 1499

  Fly   273 REFKTANRLLITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDA---------- 327
            :..|..:||:::|||:|||:.|||:|.:||:|....:.:.|.:.|:.......||          
  Fly  1500 KRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAG 1564

  Fly   328 --LITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQ----RDWYTKVLLKDIDVVNGA 386
              .:..||..:.||||||:|.:|.|.|.||....:...||.:|    .|:..|.|...:|.:..:
  Fly  1565 VLAMEALHRQVLPFLLRRVKEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLGDS 1629

  Fly   387 GKVE--------KMRLQNILMQLRKCTNHPYL-FDGAEPGPPYTTDTHL-------VYNSGKMAI 435
            ....        |..:...|..|:...|||.| ...:|.....|:...|       :.:|.|:..
  Fly  1630 SSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEELTKVTSQLALSNSSLDDIEHSAKLPA 1694

  Fly   436 LDKLLPK----LQEQG---SRVLIFSQMTRMLDILEDYC---HWRNYNYCRLDGQTPHEDRNRQI 490
            |.:||..    :|.:.   .|.|||.|:..||||:|...   |..:..|.||||..|...|...:
  Fly  1695 LKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIV 1759

  Fly   491 QEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRL 555
            ..||.|.|...| :|:|..||||:||..||.||..:.||||..|||||||||||||||.|.|:||
  Fly  1760 NNFNSDPSIDVL-LLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRL 1823

  Fly   556 ITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNIIRFGANQVFSSKETDITDE 620
            ||.:::||||:...:.|:.....|:.    .:|.|.|          ..|.:|:|.         
  Fly  1824 ITRNSLEEKIMGLQKFKILTANTVVS----AENASLQ----------TMGTSQIFD--------- 1865

  Fly   621 DIDVILERGEAKTAEQKAALDSLGESSLRTFTMDTNGEAGTSSVYQFEGEDWREKQ--KLNALGN 683
                :...|:.|.||.       |.|:::.   ..:|....:::.:...|.|.|.|  :...|||
  Fly  1866 ----LFNGGKDKGAES-------GSSAVQG---TASGGMSMNTIIENLPELWSEHQYEEEYDLGN 1916

  Fly   684 WIEPPKR 690
            :::..|:
  Fly  1917 FVQALKK 1923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IswiNP_523719.1 DBINO <30..67 CDD:290603
SNF2_N 131..411 CDD:278600 99/312 (32%)
DEXDc 148..287 CDD:238005 49/146 (34%)
HELICc 422..553 CDD:238034 62/147 (42%)
HAND 697..796 CDD:286232
SANT 797..838 CDD:197842
SANT 799..838 CDD:238096
SLIDE 853..965 CDD:286233
Hel89BNP_001287351.1 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:288874
HEAT repeat 1234..1261 CDD:293787
HEAT repeat 1269..1298 CDD:293787
SNF2_N 1353..1662 CDD:278600 98/311 (32%)
DEXDc 1370..1514 CDD:238005 49/146 (34%)
Helicase_C 1689..1813 CDD:278689 55/124 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467162
Domainoid 1 1.000 47 1.000 Domainoid score I705
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D61251at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10799
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

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