DRSC/TRiP Functional Genomics Resources

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Protein Alignment Iswi and Btaf1

DIOPT Version :9

Sequence 1:NP_523719.1 Gene:Iswi / 36390 FlyBaseID:FBgn0011604 Length:1027 Species:Drosophila melanogaster
Sequence 2:NP_001178846.1 Gene:Btaf1 / 368042 RGDID:1564130 Length:1855 Species:Rattus norvegicus


Alignment Length:680 Identity:215/680 - (31%)
Similarity:314/680 - (46%) Gaps:124/680 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 TEIFT---HFMTNSAKSPTKPKGRPKKIKDKDKEKDVADHRHRKTEQEEDEELLAEDSATKEIFR 115
            |:.|.   ..|...|..|..|....:.|:.|.||:...            |:||  |....|.::
  Rat  1213 TQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKERHFL------------EQLL--DGKKLENYK 1263

  Fly   116 FDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLG--YLKHFKNQAG 178
            .   |..| :.|:|.||..|:||:..|.:..::|||.|:||||||||:|.:|.  :.:..:..|.
  Rat  1264 I---PVPI-NAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCQRAQEYAR 1324

  Fly   179 ---------PHIVIVPKSTLQNWVNEFKKWCPS--LRAVCLIGDQDTRNTFIRDVLMPGEWDVCV 232
                     |.:|:.|.:...:||:|..|:|..  |..:...|....|   ||........::.|
  Rat  1325 SKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTER---IRLQHQVKRHNLIV 1386

  Fly   233 TSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWA 297
            .||::...:...|:...:.|.::||.|.|||.|:|||:.:::.....|::::|||:|||:.|||:
  Rat  1387 ASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVLELWS 1451

  Fly   298 LLNFLLPDVFNSSEDFDEWFNTNTCLGDDA------------LITRLHAVLKPFLLRRLKAEVEK 350
            |.:||:|....:...|...:........||            .:..||..:.||||||:|.:|.:
  Rat  1452 LFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLLRRMKEDVLQ 1516

  Fly   351 RLKPKKEMKIFVGLSKMQRDWY---TKVLLK-DID-VVNGAG---KVEKMRLQ------NILMQL 401
            .|.||.....:..||.:|...|   .|...| |:| .|:.|.   :.||.:|:      ..|..|
  Rat  1517 DLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSAALSEETEKPKLKATGHVFQALQYL 1581

  Fly   402 RKCTNHPYL-FDGAEPGPPYTTDTHLVYNSG--------KMAILDKLL-------PKLQEQGS-- 448
            ||..|||.| .....|....||:...|.||.        |::.|.:||       ....|.|:  
  Rat  1582 RKLCNHPALVLTPQHPEFKNTTEKLAVQNSSLHDIQHAPKLSALKQLLLDCGLGNGTSSESGTES 1646

  Fly   449 -----RVLIFSQMTRMLDILEDYC---HWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFML 505
                 |:|||.|:..||||:|...   |..:..|.||||..|...|:..:..||.|.|...| :|
  Rat  1647 VVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVL-LL 1710

  Fly   506 STRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAE 570
            :|..||||:||..||.|:..:.||||..||||||||||||||:.|.|:||||..|:||||:...:
  Rat  1711 TTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQK 1775

  Fly   571 VKLRLDKMVIQGGRLVDNRSNQ-LNKDEMLNIIRFGANQVFSSKETDITDEDIDVILERGEAKT- 633
            .|:.:...||.    .:|.|.| :..|::|                |:...|.|...|:.::.| 
  Rat  1776 FKMNIANTVIS----QENSSLQSMGTDQLL----------------DLFTLDKDGKAEKADSSTS 1820

  Fly   634 --AEQKAALDSL----------GESSLRTF 651
              |..|:.|::|          .|.:|.||
  Rat  1821 GKASMKSVLENLSDLWDAEQYDSEYNLETF 1850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IswiNP_523719.1 DBINO <30..67 CDD:290603 4/15 (27%)
SNF2_N 131..411 CDD:278600 100/319 (31%)
DEXDc 148..287 CDD:238005 45/151 (30%)
HELICc 422..553 CDD:238034 63/155 (41%)
HAND 697..796 CDD:286232
SANT 797..838 CDD:197842
SANT 799..838 CDD:238096
SLIDE 853..965 CDD:286233
Btaf1NP_001178846.1 HEAT repeat 292..320 CDD:293787
HEAT repeat 358..383 CDD:293787
HEAT repeat 396..425 CDD:293787
HEAT_EZ 409..460 CDD:290247
HEAT repeat 436..466 CDD:293787
HEAT repeat 481..501 CDD:293787
HEAT repeat 512..547 CDD:293787
DUF3535 592..1057 CDD:288874
HEAT repeat 1114..1142 CDD:293787
HEAT repeat 1154..1177 CDD:293787
HEAT repeat 1190..1219 CDD:293787 2/5 (40%)
SNF2_N 1275..1591 CDD:278600 99/318 (31%)
DEXDc 1292..1441 CDD:238005 45/151 (30%)
Helicase_C 1650..1750 CDD:278689 48/100 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D61251at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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